Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F16
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.046
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.3  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   5.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.7 bits (61), Expect = 0.046
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = -2

Query: 668 LCLHHFNVSXSNDIAILNCIFFIFTFSLAFSKAIVLFC-LI*RISLFFIYI*STLFNFQ* 492
           LCL +F +     +  L CI++ ++  + F+  ++ +C LI  + +++ Y    LF    
Sbjct: 197 LCLDYFTLH----LLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILF---- 248

Query: 491 TFHDRCHITIFRFY 450
           T H    + I+ FY
Sbjct: 249 TVHLLLLVCIYYFY 262



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 614 CIFFIFTFSLAFSKAIVLF 558
           C F IFT  L F  A + F
Sbjct: 171 CAFIIFTMHLLFCCAFIFF 189



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -2

Query: 614 CIFFIFTFSLAFSKAIVLF-CLI*RISLFFIY 522
           C F IFT  L F   I  F C +  I L  IY
Sbjct: 270 CAFIIFTMHLLFLLCIYYFYCAL--IILLCIY 299


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 541 FLYFLYIFKVHFSTFNKH 488
           F YF+Y+F V++  ++ H
Sbjct: 147 FCYFIYLFTVYYIYYSVH 164


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 403 VSIHYICIYKYMYAFT 450
           V++H +C   YMYAFT
Sbjct: 58  VTLH-VCFNSYMYAFT 72


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 181 KILLKYKSFIPDSVVK 134
           K+LLK+  F+ D++VK
Sbjct: 113 KLLLKHNLFLLDNIVK 128


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 427 IYICSVYLRHVLKTNGLHVI 368
           ++  + Y RH++  NG HVI
Sbjct: 506 LFAPNTYNRHLVAPNGDHVI 525


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,972
Number of Sequences: 336
Number of extensions: 2420
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)