Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F15
(772 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 352 1e-97
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 30 1.6
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 30 1.6
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 29 2.8
Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical pr... 29 3.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical... 29 3.7
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 29 4.8
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 29 4.8
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 29 4.8
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 6.4
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 28 6.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 8.5
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 8.5
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 8.5
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 352 bits (866), Expect = 1e-97
Identities = 167/227 (73%), Positives = 195/227 (85%), Gaps = 1/227 (0%)
Frame = -3
Query: 746 MAVN-NISKKRKFVGDGVFKAELNEFLXREXAEDGYSGVEVRVTPIRSEIIIMATRTQSV 570
MA N N++KK+K V G+FKAELN FL +E AEDGYSGVEVR TP R+E+IIMATRTQ+V
Sbjct: 1 MAANQNVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNV 60
Query: 569 LGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRA 390
LGE+GRRI+ELTSVVQKRF E SVELYAEKV+ RGLCA+AQ ESLRYKL+GGLAVRRA
Sbjct: 61 LGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRA 120
Query: 389 CYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLR 210
CYGVLRFIMESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A RHV LR
Sbjct: 121 CYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLR 180
Query: 209 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 69
QGV+GIKVKIMLP+D +G+NGP+ PDH+ + EP++E +P EP S+
Sbjct: 181 QGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2
Query: 240 QHCYQTCASQTRSTRNQGQNHVA 172
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = -2
Query: 240 QHCYQTCASQTRSTRNQGQNHVA 172
Q CY CAS T ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -3
Query: 581 TQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATR 462
+ S+ G+KG+ +REL + + K ++ E++ + AE A R
Sbjct: 396 SSSIHGKKGKTVRELQTEMMKGESVKEKAARMRAEASAGR 435
>Z31590-7|CAA83463.1| 361|Caenorhabditis elegans Hypothetical
protein R01H10.6 protein.
Length = 361
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 246 IITRVSRVDHESIYKLH*FGTLTTQLARYNNFTTTGTRFHDETENTIASTTYSETSDKL 422
++TR + +E+IY L TT+ FTTT H + NTI+S + + + K+
Sbjct: 89 LVTRNRGISNEAIYVLAKVSATTTKFEFI--FTTTNPASHSKLFNTISSISRAYETTKM 145
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 143 KKPQPDHILVTEPKD-EPVPLEPTSEVRSLAPAPLPQPGRRWR 18
KKP+P V++PK+ P EP S V + P P+ P ++W+
Sbjct: 855 KKPEP----VSKPKEPSPKKAEPNSPV--VPPTPVKNPVKKWK 891
>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
protein F25E5.1 protein.
Length = 1062
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 152 NGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQ 36
NGPKK + +L+T P E V E + +P+P P+
Sbjct: 998 NGPKKSKNQMMLITFPSREIVEEEEPPQEAEQSPSPDPE 1036
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 755 VAIMAVNNISKKRKFVGDGVFKAELNEFLXREXAEDGY 642
+A +I KK F GDG F E E +DGY
Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 755 VAIMAVNNISKKRKFVGDGVFKAELNEFLXREXAEDGY 642
+A +I KK F GDG F E E +DGY
Sbjct: 885 IAARLSRDIPKKFSFKGDGEFFVSQREVFENEILDDGY 922
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 128 DHILVTEPKDEPVPLEPTSE----VRSLAPAPLPQPGRRWRLGY 9
D + + P P+ TS R++APAP P PG+ +++ Y
Sbjct: 173 DDVPSSPPAKRTTPIHWTSSSQNHYRTMAPAPPPPPGKNYQITY 216
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 128 DHILVTEPKDEPVPLEPTSE----VRSLAPAPLPQPGRRWRLGY 9
D + + P P+ TS R++APAP P PG+ +++ Y
Sbjct: 473 DDVPSSPPAKRTTPIHWTSSSQNHYRTMAPAPPPPPGKNYQITY 516
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 140 KPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQPGRRWRLGYKT 3
KP P + +PK +P P+ L P P+P P + +L KT
Sbjct: 243 KPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKPKLKPKT 288
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 33
P P+ V EP P P EPT + P P+ +P
Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEPEPVREP 570
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 116 VTEPKDEPVPLEPTSEVRSLAPAPLPQP 33
V EP +EP P SE+ S PAP P P
Sbjct: 547 VPEPTEEP-PTPTDSEIDSPTPAPAPGP 573
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 116 VTEPKDEPVPLEPTSEVRSLAPAPLPQP 33
V EP +EP P SE+ S PAP P P
Sbjct: 547 VPEPTEEP-PTPTDSEIDSPTPAPAPGP 573
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPLEPTSE-VRSLAPAPLPQP 33
PQ + VT P EPVP EP E V P P+ +P
Sbjct: 103 PQVPKVAVTLPVPEPVP-EPVPEPVPESTPEPISEP 137
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 146 PKKPQPDHILVTEPKDEPVPLEPTSEVRSLAPAPLPQP 33
P P P V + + P P +V+ PAP+P P
Sbjct: 55 PAAPAPAPASVQQQPEAPAPAPTAPDVQQPGPAPVPVP 92
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -2
Query: 240 QHCYQTCASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 76
Q C Q S +S N + GPA++ RPE P DR + + R D
Sbjct: 113 QSCLQNELSALKSANNAMKTSKN-GPAKEHRPENGKLSPETLDRGKEENQEGRQD 166
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = -3
Query: 137 PQPDHILVTEPKDEPVPL---EPTSE 69
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -3
Query: 647 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 498
G G + IR+E+ + ++G+ G+ +REL + IPE+
Sbjct: 547 GMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 596
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -3
Query: 647 GYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 498
G G + IR+E+ + ++G+ G+ +REL + IPE+
Sbjct: 671 GMDGDRSHMLRIRTEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPEE 720
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 94 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 195
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 94 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 195
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,442,954
Number of Sequences: 27780
Number of extensions: 387469
Number of successful extensions: 1662
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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