Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F14
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MG90 Cluster: Putative leucine-rich receptor-like pro...    33   5.9  
UniRef50_Q3KDI5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q5MG90 Cluster: Putative leucine-rich receptor-like
           protein; n=1; Ipomoea batatas|Rep: Putative leucine-rich
           receptor-like protein - Ipomoea batatas (Sweet potato)
           (Batate)
          Length = 101

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 430 VQTHLKRFWNTTHRLLNIYSLN-RYLCRN*N*TISISASYKILKLRT 567
           +Q HL+   N  HR LN   LN  +L RN N +I + + Y++L LR+
Sbjct: 1   MQEHLRMLSNFLHRYLNFDLLNIDFLARN-NISIRVQSLYRVLTLRS 46


>UniRef50_Q3KDI5 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens PfO-1|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens
           (strain PfO-1)
          Length = 300

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
 Frame = +2

Query: 119 FDFNSKY*SNIILQTGA*VISELKKYHSLG-----NHRKSVLVVWVEKGLFPTVNCQQIM 283
           F + SK    +I Q+GA + + L +YHSL       H+K ++    +K +   ++   I 
Sbjct: 217 FVYPSKNNRRVIAQSGAFIAAGLLQYHSLEQSAGLKHKKIIIPCQCKKKIVAQLDALNIN 276

Query: 284 KCSHVPEKNFT*KY 325
             +  PE  FT KY
Sbjct: 277 SRTMFPEVEFTSKY 290


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,329,926
Number of Sequences: 1657284
Number of extensions: 11215533
Number of successful extensions: 19990
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19989
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)