Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F14
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97403-1|AAB52468.1|  237|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p...    28   4.9  
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.      28   4.9  
Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.      28   6.5  
Z73098-13|CAA97340.2|  246|Caenorhabditis elegans Hypothetical p...    27   8.6  
U88178-7|ABA03111.1|  439|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AC006676-2|AAK71382.3|  439|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U97403-1|AAB52468.1|  237|Caenorhabditis elegans Hypothetical
           protein T10E9.5 protein.
          Length = 237

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 458 FQKRFKCVWTLSCLCFVTIPHLTLDL*CFHNLFI 357
           F+   +   +L CLCFV I  L++     HN+++
Sbjct: 75  FEVNLRLAISLKCLCFVIITSLSIGPLMIHNMYL 108


>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
           protein C35C5.1 protein.
          Length = 2962

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 158 QTGA*VISELKKYHSLGNHRKSVLVVWVEK 247
           Q G     EL K+H +G H     VVW  K
Sbjct: 462 QVGTISAKELHKFHRIGRHIHGFFVVWENK 491


>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
           protein C35C5.1 protein.
          Length = 2962

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 158 QTGA*VISELKKYHSLGNHRKSVLVVWVEK 247
           Q G     EL K+H +G H     VVW  K
Sbjct: 462 QVGTISAKELHKFHRIGRHIHGFFVVWENK 491


>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
          Length = 2962

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +2

Query: 158 QTGA*VISELKKYHSLGNHRKSVLVVWVEK 247
           Q G     EL K+H +G H     VVW  K
Sbjct: 462 QVGTISAKELHKFHRIGRHIHGFFVVWENK 491


>Z99169-1|CAB16306.2|  966|Caenorhabditis elegans Hypothetical
           protein C26H9A.1 protein.
          Length = 966

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 511 SCINIYLMNKCLTVYVLCSKNALNVFG 431
           SCI IYL  + +  ++  S NA NVFG
Sbjct: 652 SCIFIYLCIQIIVKWIFFSVNAENVFG 678


>AB055112-1|BAB62293.1|  966|Caenorhabditis elegans VHA-7 protein.
          Length = 966

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 511 SCINIYLMNKCLTVYVLCSKNALNVFG 431
           SCI IYL  + +  ++  S NA NVFG
Sbjct: 652 SCIFIYLCIQIIVKWIFFSVNAENVFG 678


>Z73098-13|CAA97340.2|  246|Caenorhabditis elegans Hypothetical
           protein T21C9.13 protein.
          Length = 246

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 206 LVNGIFLIQRLLMPLFVIL 150
           L +G+FL +RL MPL++ L
Sbjct: 128 LFSGVFLYRRLFMPLYIFL 146


>U88178-7|ABA03111.1|  439|Caenorhabditis elegans Hypothetical
           protein W09C3.1 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 253 ISNSELSADNEMFTCSRKKLYIKILHKYTDLH 348
           + N+  + D  +  C R  L IK +H+YT +H
Sbjct: 119 LMNNNFNQDTIIRVCIRTLLAIKTMHEYTYIH 150


>AC006676-2|AAK71382.3|  439|Caenorhabditis elegans Hypothetical
           protein M04F3.3 protein.
          Length = 439

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 253 ISNSELSADNEMFTCSRKKLYIKILHKYTDLH 348
           + N+  + D  +  C R  L IK +H+YT +H
Sbjct: 119 LMNNNFNQDTIIRVCIRTLLAIKTMHEYTYIH 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,237,898
Number of Sequences: 27780
Number of extensions: 297626
Number of successful extensions: 536
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)