Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F14
         (641 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.4  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +1

Query: 412 KHKQLNVQTHLKRFWNTTHRLLNIYSLNRYLCRN*N*TISISASYKILKLRTQFIGVNIY 591
           K  +++ Q   +RF+N   +L  I   ++  CR+     S   +Y + K + +   V  +
Sbjct: 543 KPSRISKQGLFRRFYNLLGKLSTIEDADKNQCRHYLDAKSSVQNYSLAKHQLKEAFVKAH 602

Query: 592 FGINSWCR 615
            G  SW +
Sbjct: 603 LG--SWVK 608


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 306 KTLHKNIT*IH*F-TLHRNEKIMKTSKI 386
           + LH +I   H   TLH N   +KTSKI
Sbjct: 149 RCLHHDIENAHIRRTLHMNRTSLKTSKI 176


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 519 LNYLNFSQL*DFEAPNSIHWRQYLFWN 599
           LN+ N  Q+ D +A N++  +  +F+N
Sbjct: 506 LNFSNEEQIVDLKAFNNVPKKLNMFYN 532


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 519 LNYLNFSQL*DFEAPNSIHWRQYLFWN 599
           LN+ N  Q+ D +A N++  +  +F+N
Sbjct: 506 LNFSNEEQIVDLKAFNNVPKKLNMFYN 532


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,268
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)