Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F12
(450 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 0.76
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 22 2.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 2.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 2.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 2.3
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 3.1
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 22 3.1
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 3.1
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 3.1
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 21 4.0
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 21 4.0
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 7.1
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.8 bits (49), Expect = 0.76
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 207 KIDSVSSRAWWIV 169
K DSV+S AWW V
Sbjct: 180 KSDSVTSNAWWDV 192
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 22.2 bits (45), Expect = 2.3
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 HQSMYWDQYKA--THQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTS 241
H + D Y TH + ++ + +++ +E SI +A VHGT+
Sbjct: 25 HLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTT 80
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 2.3
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 HQSMYWDQYKA--THQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTS 241
H + D Y TH + ++ + +++ +E SI +A VHGT+
Sbjct: 339 HLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTT 394
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.3
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 HQSMYWDQYKA--THQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTS 241
H + D Y TH + ++ + +++ +E SI +A VHGT+
Sbjct: 572 HLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTT 627
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.3
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 HQSMYWDQYKA--THQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTS 241
H + D Y TH + ++ + +++ +E SI +A VHGT+
Sbjct: 572 HLGLKHDNYYELETHIFFDDAFIRTSEDDNDPHVNEYVESLASIIDEAATKVHGTT 627
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.8 bits (44), Expect = 3.1
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -2
Query: 245 VWTYRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPST 90
++TYR P P +K Q W W + E HI G P + ST
Sbjct: 38 LYTYR--QPYPRQKKSHPPQ------WTWQCINQRCERRHIKGAIPVVSLST 81
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.8 bits (44), Expect = 3.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 98 DQYKATHQLYAQVQLQCD 151
D Y TH +Y+ V LQ D
Sbjct: 49 DPYLCTHIIYSFVGLQAD 66
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 3.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 445 EFGRPMIFRCRF 410
+FGRP F C F
Sbjct: 340 DFGRPATFTCNF 351
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 3.1
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Frame = -2
Query: 149 HIATEPEHITGEWPYIDP----STWT 84
H+ P+HI PY P STW+
Sbjct: 283 HVYNPPDHIQQATPYSAPGPTYSTWS 308
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 21.4 bits (43), Expect = 4.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 265 NEMQDMEFGRTVYRHQCLPKNRFG*LKGLVDCAGG 161
NE+ D+ R YRH K RF L+ L+ GG
Sbjct: 71 NELFDVT--RDNYRHITELKRRFPGLRVLLSVGGG 103
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.4 bits (43), Expect = 4.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 389 TKFIEEANKLLE 354
TKFIE NKL+E
Sbjct: 100 TKFIEFINKLIE 111
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 20.6 bits (41), Expect = 7.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3
Query: 213 RHWWRYTVRPNSMSCISFGLFQAASVASVLQPTE 314
R+W P C + +F S+ V+ PTE
Sbjct: 172 RYWQCQGGYPRLQRCPAMLVFDRRSLRCVVPPTE 205
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,926
Number of Sequences: 336
Number of extensions: 2518
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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