Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F09
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 41  QNKCIHVILSLSKNSNKMPH 100
           QNK I VI  L K  NK+ H
Sbjct: 101 QNKLIEVISKLHKLDNKLKH 120


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 745  HNHVVASNDSNIGNMHLTEKFIFDNGYL 662
            +N+VVA N  N     +  K +F+NG++
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 745  HNHVVASNDSNIGNMHLTEKFIFDNGYL 662
            +N+VVA N  N     +  K +F+NG++
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 745  HNHVVASNDSNIGNMHLTEKFIFDNGYL 662
            +N+VVA N  N     +  K +F+NG++
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 745  HNHVVASNDSNIGNMHLTEKFIFDNGYL 662
            +N+VVA N  N     +  K +F+NG++
Sbjct: 1498 NNNVVARNHRNSVASSIPAKDVFENGHV 1525


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 213 FCINIYIYIVFTYYDYGKHVLVLFNL 136
           +C N Y+ +V T+Y       +L NL
Sbjct: 76  YCFNYYVIVVTTFYKRRTWTRLLKNL 101



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 334 LKTILVLNLHVKLTYFFYYENVLTIFY 254
           +K +L+      L  F YY  V+T FY
Sbjct: 63  IKIVLMFFKEASLYCFNYYVIVVTTFY 89


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 611 TYLFFNQ*LTFGTALHLLKCS 549
           +Y+ F    TFGT L ++ CS
Sbjct: 259 SYILFALFNTFGTILLIMTCS 279


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -3

Query: 228 HRIMDFCINIYI--YIVFTYYDYGKHVLVLFNLGLMTFVCPDEAK*GILF 85
           H +   CI  +   +I+FT +       + FN+ L+  +C D     +LF
Sbjct: 159 HLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLF 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,531
Number of Sequences: 336
Number of extensions: 3846
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)