Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F09
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z35604-4|CAA84678.1|  442|Caenorhabditis elegans Hypothetical pr...    29   2.6  

>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 461 YNIDTKYVINVTSYYVSVF-LEWAVTALRAQNILKGAVLCQKLVTD 595
           YNI      +V +++  +F + W VTA   QN+  GA L  +L+T+
Sbjct: 117 YNIAKICKTSVLAHFEDIFDVLWRVTADSDQNVRGGAELLNRLITE 162


>Z35604-4|CAA84678.1|  442|Caenorhabditis elegans Hypothetical
           protein ZK1058.4 protein.
          Length = 442

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 470 QYYIKFSWKYWTGANKIIGMF*ILYQSGVVSLISTYQTGYHVFSLTQNYFGFKPA 306
           Q+ +  SW+ +   N+++  F IL   GVVSL+  ++       ++  + G KPA
Sbjct: 261 QFNLPASWQVYADQNEVV--FSIL-DPGVVSLLKKHEDAIEFIHISDQFTGPKPA 312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,102,933
Number of Sequences: 27780
Number of extensions: 329304
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)