Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F08
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.55 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    24   0.96 
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    23   2.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 310 YHNSPRILAVAKGLEYKWDDRTSI*YAY 227
           Y   P IL    G   KWD+   + YAY
Sbjct: 310 YEICPEILNKDSGWTKKWDEHGKVPYAY 337


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 44  SRSLQLLSRAXCFPNSSFLPLKXNLC 121
           +RS++L   A C  N  +LP+   LC
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLC 181


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 143 RAQCFSTVYLIHC 181
           R++CFST Y + C
Sbjct: 86  RSECFSTKYFVGC 98


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 522 YTE*CKFVGAILRVWLEEWHAP 587
           + E C F     RVWL++   P
Sbjct: 284 FNEICSFYSDWTRVWLDDAQVP 305


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 50  SLQLLSRAXCFPNSSFLPLKXNLCLSQLR 136
           SLQ+L+    F  + F P+  +L  S+ +
Sbjct: 685 SLQILNERAGFSAAGFFPIDYSLVFSETK 713


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 410 SFVN*YIIFNLYLSIVLMY 354
           SF   + IFNLY+ ++L++
Sbjct: 112 SFRMNFAIFNLYMVLLLLF 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,817
Number of Sequences: 336
Number of extensions: 2021
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)