Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F06
         (584 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5A981 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q9ZE03 Cluster: OUTER MEMBRANE PROTEIN OMP1; n=10; Rick...    33   6.6  

>UniRef50_Q5A981 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 196

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +1

Query: 328 YFDLMLIILDSKF*TLKF*SSRTQIGFLSSHSYDI*QICGIYMNNTKAENF-MTRFRTKD 504
           YF L L  +D  F T+    SRT + FL+ H  DI Q   IY NNTKA+   +    T +
Sbjct: 25  YFCLFLGSIDDHF-TIY---SRTYLIFLTLH--DIMQFYTIYRNNTKAKKIKIKEVYTTN 78

Query: 505 DRYLQKSNLR 534
           D+Y  +S  R
Sbjct: 79  DKYCNQSQNR 88


>UniRef50_Q9ZE03 Cluster: OUTER MEMBRANE PROTEIN OMP1; n=10;
           Rickettsia|Rep: OUTER MEMBRANE PROTEIN OMP1 - Rickettsia
           prowazekii
          Length = 768

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -3

Query: 402 YLRSGTSEFESLKFRVEYNKHEIEI*CKIYNKFM 301
           YL SGT EF  +    +Y KHEIE  CK Y  F+
Sbjct: 581 YLVSGTQEFAGVGGDNKYIKHEIE--CKFYKSFI 612


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,178,577
Number of Sequences: 1657284
Number of extensions: 7791662
Number of successful extensions: 14272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14271
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)