Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_F06
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.47 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -1

Query: 296 LFYCILIVFIVNCLFNYGHDY*EYTKRLVL 207
           LFYC+LI+ +  C++ + + +  +T  L+L
Sbjct: 227 LFYCVLIILL--CIYYFYYAFILFTVHLLL 254



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 296 LFYCILIVFIVNCLFNYGHDY*EYTKRLVLCNMY 195
           LFYC  I+F V+ L    + Y  Y   ++LC  Y
Sbjct: 84  LFYCPFIIFTVHFLLCTYYFY--YAFIILLCVYY 115



 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 293 FYCILIVFIVNCLF 252
           FYC  I+F V+ LF
Sbjct: 149 FYCAFIIFTVHLLF 162



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 351 YNKHEIEI*CKIYNKFMKFILLYPHCVYC 265
           +  H + + C IY+ F  FI+   H ++C
Sbjct: 156 FTVHLLFLLC-IYHFFCAFIIFTMHLLFC 183


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 446 PHICHMSYECDDKK 405
           PHIC   Y C D K
Sbjct: 119 PHICDKFYYCVDGK 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,704
Number of Sequences: 336
Number of extensions: 2431
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)