Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F01
(709 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F666 Cluster: Phytanoyl-CoA dioxygenase peroxisomal; ... 158 1e-37
UniRef50_UPI0000D56876 Cluster: PREDICTED: similar to Phytanoyl-... 90 6e-17
UniRef50_A0D9F7 Cluster: Chromosome undetermined scaffold_42, wh... 82 2e-14
UniRef50_O14832 Cluster: Phytanoyl-CoA dioxygenase, peroxisomal ... 79 1e-13
UniRef50_UPI0000E46B2D Cluster: PREDICTED: similar to phytanoyl-... 63 7e-09
UniRef50_UPI00015B5182 Cluster: PREDICTED: similar to phytanoyl-... 62 1e-08
UniRef50_O62514 Cluster: Putative uncharacterized protein; n=2; ... 55 1e-06
UniRef50_Q1H1Y0 Cluster: Phytanoyl-CoA dioxygenase; n=1; Methylo... 38 0.32
UniRef50_Q5K809 Cluster: Galactose metabolism-related protein, p... 35 2.3
UniRef50_Q2SH96 Cluster: Protein involved in biosynthesis of mit... 33 5.2
UniRef50_Q1E2I3 Cluster: Protein DML1; n=5; Eurotiomycetidae|Rep... 33 5.2
UniRef50_A6W4Q2 Cluster: Binding-protein-dependent transport sys... 33 9.1
>UniRef50_Q2F666 Cluster: Phytanoyl-CoA dioxygenase peroxisomal;
n=1; Bombyx mori|Rep: Phytanoyl-CoA dioxygenase
peroxisomal - Bombyx mori (Silk moth)
Length = 300
Score = 158 bits (384), Expect = 1e-37
Identities = 74/77 (96%), Positives = 76/77 (98%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATRRGLQVTYQ 528
HPRLLHGSGPNRTQRHRKAITVHFASSAC YVDVRGSVQERLAADVQAAATRRGL+V+YQ
Sbjct: 224 HPRLLHGSGPNRTQRHRKAITVHFASSACEYVDVRGSVQERLAADVQAAATRRGLRVSYQ 283
Query: 527 DIWRYKSKQVKGVRSNL 477
DIWRYKSKQVKGVRSNL
Sbjct: 284 DIWRYKSKQVKGVRSNL 300
>UniRef50_UPI0000D56876 Cluster: PREDICTED: similar to Phytanoyl-CoA
dioxygenase, peroxisomal precursor (Phytanoyl-CoA
alpha-hydroxylase) (PhyH) (Phytanic acid oxidase); n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
Phytanoyl-CoA dioxygenase, peroxisomal precursor
(Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid
oxidase) - Tribolium castaneum
Length = 298
Score = 89.8 bits (213), Expect = 6e-17
Identities = 36/76 (47%), Positives = 56/76 (73%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATRRGLQVTYQ 528
HP LLHGSGPNRT+ RKAI+ H+A S C ++DVRG++QE +A +++ A ++G + +
Sbjct: 215 HPILLHGSGPNRTKGFRKAISCHYADSNCYFIDVRGTLQEHIAEEIETLAKKKGAPMKFV 274
Query: 527 DIWRYKSKQVKGVRSN 480
+IW+ KS+ V+G+ N
Sbjct: 275 EIWKAKSRLVRGIPGN 290
>UniRef50_A0D9F7 Cluster: Chromosome undetermined scaffold_42, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_42,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 311
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATRRGLQVTYQ 528
HP L HGSG NRT RK+I HFASS C Y D++G+ E LA D+ A A+++ V Y
Sbjct: 233 HPYLFHGSGENRTTNFRKSICCHFASSNCQYHDIKGTFHENLANDIIAYASKKFGHVNYL 292
Query: 527 DIWRYKSKQVKG 492
DIWR+K + V+G
Sbjct: 293 DIWRFKCRLVQG 304
>UniRef50_O14832 Cluster: Phytanoyl-CoA dioxygenase, peroxisomal
precursor; n=45; Eumetazoa|Rep: Phytanoyl-CoA
dioxygenase, peroxisomal precursor - Homo sapiens
(Human)
Length = 338
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>UniRef50_UPI0000E46B2D Cluster: PREDICTED: similar to phytanoyl-CoA
hydroxylase-like protein, partial; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
phytanoyl-CoA hydroxylase-like protein, partial -
Strongylocentrotus purpuratus
Length = 95
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATRR 549
HP LLHGSG N+T RKAI+ H+ASS C Y+DV G+ Q +A ++ A R+
Sbjct: 33 HPLLLHGSGTNKTSGFRKAISCHYASSNCHYIDVAGTTQANMANEITDVAKRK 85
>UniRef50_UPI00015B5182 Cluster: PREDICTED: similar to phytanoyl-CoA
2-hydroxylase; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to phytanoyl-CoA 2-hydroxylase - Nasonia
vitripennis
Length = 289
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATRR---GLQV 537
HP L+HGS N + R RKAI+ H+AS+ Y+ V G+VQ+ + +V RR +
Sbjct: 210 HPLLIHGSWKNVSTRTRKAISCHYASADVEYIKVEGTVQQLIEEEVLEIFRRRFPSSSDI 269
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+ DIW+ +S ++G++S+L
Sbjct: 270 NFIDIWKLRSMLMRGIQSSL 289
>UniRef50_O62514 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 328
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFAS-SACGYVDVRGSVQERLAADVQ--------AAAT 555
HP L HGSG NR++ RKAI+ H+A+ Y+DV+G+ QE ++ A
Sbjct: 242 HPCLFHGSGANRSEGFRKAISCHYANYDHTKYIDVKGTAQEEAGKQIEDIIRKHPKRYAV 301
Query: 554 RRGLQVTYQDIWRYKSKQV 498
+ G +VT++ WR +S+ V
Sbjct: 302 KPGQEVTFELTWRLRSRPV 320
>UniRef50_Q1H1Y0 Cluster: Phytanoyl-CoA dioxygenase; n=1;
Methylobacillus flagellatus KT|Rep: Phytanoyl-CoA
dioxygenase - Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875)
Length = 295
Score = 37.5 bits (83), Expect = 0.32
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHF 636
HPRLLHG PNR+ R R I V F
Sbjct: 203 HPRLLHGGNPNRSDRERDVIIVQF 226
>UniRef50_Q5K809 Cluster: Galactose metabolism-related protein,
putative; n=7; Basidiomycota|Rep: Galactose
metabolism-related protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 390
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 587 RLAADVQAAATRRGLQVTYQDIWRYKSKQVKGVRS 483
RLA + RRGLQ QD+WR++S V G S
Sbjct: 356 RLAQEELGFIARRGLQEMCQDLWRFQSSNVNGYSS 390
>UniRef50_Q2SH96 Cluster: Protein involved in biosynthesis of
mitomycin antibiotics/polyketide fumonisin; n=3;
Gammaproteobacteria|Rep: Protein involved in
biosynthesis of mitomycin antibiotics/polyketide
fumonisin - Hahella chejuensis (strain KCTC 2396)
Length = 275
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGY 615
H L H S PNR+ + R A+T H AC Y
Sbjct: 229 HGHLPHYSAPNRSDKSRIALTFHVVDGACEY 259
>UniRef50_Q1E2I3 Cluster: Protein DML1; n=5; Eurotiomycetidae|Rep:
Protein DML1 - Coccidioides immitis
Length = 509
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -1
Query: 442 ERDYFRLASCIKAPSIVSRTSCEHVTSDRPRDRLPHYKQLKLACLQLWWI 293
E+ + R + K+ S +SR S +V P +LPHY L +A W+I
Sbjct: 239 EKQFLRAKNSAKSISEISRQSTAYVPISMPPSKLPHYVNLNIA--SEWYI 286
>UniRef50_A6W4Q2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=3;
Actinomycetales|Rep: Binding-protein-dependent transport
systems inner membrane component - Kineococcus
radiotolerans SRS30216
Length = 294
Score = 32.7 bits (71), Expect = 9.1
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 226 GPPYVMLTRLICPSNIFLLQRHLSTTVVSMQVLVACSAADDRAV 357
G V LT + +FL Q + TV+S+ VLVA AA D+ V
Sbjct: 242 GTAPVFLTGFVTSQGLFLAQLCAAATVISLPVLVAGFAAQDKLV 285
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,499,555
Number of Sequences: 1657284
Number of extensions: 11428075
Number of successful extensions: 35707
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 30328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35509
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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