Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F01
(709 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein. 79 2e-14
BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 79 2e-14
AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA 2-hydroxy... 79 2e-14
AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA 2-hydroxy... 79 2e-14
AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxyla... 79 2e-14
AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha hyd... 79 2e-14
AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-C... 79 2e-14
AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA 2-hydroxy... 31 4.0
>CR542055-1|CAG46852.1| 338|Homo sapiens PHYH protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>BC029512-1|AAH29512.1| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>AL138764-6|CAM15086.1| 321|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 321
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 242 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 301
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 302 NLKDIWMFRARLVKGERTNL 321
>AL138764-5|CAI12911.2| 338|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>AF242386-1|AAF74123.1| 338|Homo sapiens phytanoyl-CoA hydroxylase
protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>AF112977-1|AAD20602.1| 338|Homo sapiens phytanoil-CoA alpha
hydroxylase protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>AF023462-1|AAB81834.1| 338|Homo sapiens peroxisomal phytanoyl-CoA
alpha-hydroxylase protein.
Length = 338
Score = 79.0 bits (186), Expect = 2e-14
Identities = 38/80 (47%), Positives = 55/80 (68%), Gaps = 3/80 (3%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFASSACGYVDVRGSVQERLAADVQAAATR-RGLQ--V 537
HP L+HGSG N+TQ RKAI+ HFAS+ C Y+DV+G+ QE + +V A + G + V
Sbjct: 259 HPLLIHGSGQNKTQGFRKAISCHFASADCHYIDVKGTSQENIEKEVVGIAHKFFGAENSV 318
Query: 536 TYQDIWRYKSKQVKGVRSNL 477
+DIW ++++ VKG R+NL
Sbjct: 319 NLKDIWMFRARLVKGERTNL 338
>AL138764-4|CAI12910.1| 296|Homo sapiens phytanoyl-CoA
2-hydroxylase protein.
Length = 296
Score = 31.1 bits (67), Expect = 4.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRK 654
HP L+HGSG N+TQ RK
Sbjct: 279 HPLLIHGSGQNKTQGFRK 296
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,029,371
Number of Sequences: 237096
Number of extensions: 1860588
Number of successful extensions: 8463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8452
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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