Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_F01
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 28 5.7
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 28 5.7
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 28 5.7
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 28 5.7
U80840-4|AAB37931.1| 340|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 28 5.7
Z81517-4|CAB04211.1| 350|Caenorhabditis elegans Hypothetical pr... 28 7.5
>Z82287-6|CAB05318.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFAS-SACGYVDVRGSVQERLAADVQAAA----TRRGL 543
HP L+HGSG NRT+ RKAI+ H+A+ C YV+V G+ QE LA ++ A TR GL
Sbjct: 226 HPILIHGSGANRTEGFRKAISCHYANDDLCRYVNVEGTTQETLAEEIIEIAKKRLTRYGL 285
Query: 542 Q-----VTYQDIWRYKSKQVKGVRSNL 477
+ + DIWR ++++V G RSNL
Sbjct: 286 DPNTVTLDFADIWRVRAREVNGRRSNL 312
>Z80223-9|CAB02322.1| 312|Caenorhabditis elegans Hypothetical
protein ZK550.6 protein.
Length = 312
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 10/87 (11%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFAS-SACGYVDVRGSVQERLAADVQAAA----TRRGL 543
HP L+HGSG NRT+ RKAI+ H+A+ C YV+V G+ QE LA ++ A TR GL
Sbjct: 226 HPILIHGSGANRTEGFRKAISCHYANDDLCRYVNVEGTTQETLAEEIIEIAKKRLTRYGL 285
Query: 542 Q-----VTYQDIWRYKSKQVKGVRSNL 477
+ + DIWR ++++V G RSNL
Sbjct: 286 DPNTVTLDFADIWRVRAREVNGRRSNL 312
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Frame = -3
Query: 707 HPRLLHGSGPNRTQRHRKAITVHFAS-SACGYVDVRGSVQERLAADVQ--------AAAT 555
HP L HGSG NR++ RKAI+ H+A+ Y+DV+G+ QE ++ A
Sbjct: 242 HPCLFHGSGANRSEGFRKAISCHYANYDHTKYIDVKGTAQEEAGKQIEDIIRKHPKRYAV 301
Query: 554 RRGLQVTYQDIWRYKSKQV 498
+ G +VT++ WR +S+ V
Sbjct: 302 KPGQEVTFELTWRLRSRPV 320
>Z74472-6|CAA98947.1| 1025|Caenorhabditis elegans Hypothetical
protein F23H12.6 protein.
Length = 1025
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 211 GRRPRGPPYVMLTRLICPSNIFLLQRHLSTTVVSMQVLVACSAADDRAVYLMLRAHKMSE 390
G+ P+ P + CP N F+ +L V+ ++V C AA A +L+++A + E
Sbjct: 411 GKLPQTRPECGYSGKSCPVNFFV--DYLYIVVIVAVIIVLCCAAAAIAAFLVIKARRDEE 468
Query: 391 TR 396
R
Sbjct: 469 LR 470
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>U80840-4|AAB37931.1| 340|Caenorhabditis elegans Hypothetical
protein F08D12.9 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 584 LAADVQAAATRRGLQVTYQDIWRYKSKQVKGVRSNL 477
LA Q + GL+V D W Y V +RSNL
Sbjct: 141 LANSRQISKVLNGLKVKNMDFWNYTEDGVFNIRSNL 176
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 137 PINNLLQRHLSATVVSMHVFVTRSAADDRAVLLTLCL 247
P+ NL++R + HV V++ DDR V LT L
Sbjct: 109 PVRNLVKRLSEVSSWITHVIVSQPTHDDRKVALTAIL 145
>Z81517-4|CAB04211.1| 350|Caenorhabditis elegans Hypothetical
protein F28B1.4 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -1
Query: 529 RTSGGTKVNKSKV*DRICKQYIKKFIFLYERD 434
R GT++++ + D +CKQ+ K+++ YE +
Sbjct: 224 RFLNGTQMSQIPLTDLVCKQHDDKYVWFYEEN 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,729
Number of Sequences: 27780
Number of extensions: 285464
Number of successful extensions: 722
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -