Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E17
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          24   3.1  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   4.1  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   5.4  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.4  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    22   9.5  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 198 LYYITKLSNQCEYRHPS*KSRSISV 272
           L+ I+K+  +C Y+HP+ +  S+ +
Sbjct: 324 LHAISKVMKECWYQHPAARLSSLRI 348


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/54 (22%), Positives = 23/54 (42%)
 Frame = +1

Query: 181 MSMIFDCTTLQNLVINVNTVIHLKSRDRFLYCLVISKSQFLK*NFSCDFQRDCV 342
           +S +F C  L + ++ V   +  +  +  +Y +      F   NF  +F   CV
Sbjct: 378 VSTVFVCLNLPSYIVRVKIYLETEHTNMNIYLVQNCCQLFFMTNFGINFILYCV 431


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 442 ACSCNKECCV*ETRRIFKIQS 380
           AC C K C   E +R+  +Q+
Sbjct: 64  ACQCEKCCLTAERQRVMALQT 84


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 442 ACSCNKECCV*ETRRIFKIQS 380
           AC C K C   E +R+  +Q+
Sbjct: 64  ACQCEKCCLTAERQRVMALQT 84


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 330 LEVA*EVSLQKLRFAYHQAIQKSISTFKM 244
           LE    + ++K R AY++AI   I  FK+
Sbjct: 178 LEFVRAIPVRKERAAYYKAIGPVIRNFKL 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,462
Number of Sequences: 2352
Number of extensions: 6515
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)