Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E17
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase prote...    29   1.7  
AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase pro...    29   1.7  
Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death ab...    28   3.0  
Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z83218-3|CAB05688.1|  330|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical ...    27   9.1  
AC087078-1|AAG37943.1|  198|Caenorhabditis elegans Hypothetical ...    27   9.1  

>U80453-4|AAK31441.2|  674|Caenorhabditis elegans Trehalase protein
           5 protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 78  WKSLTEQLINYMDENIHFISKRIHF 152
           W+ +TEQL N  D +    ++R+HF
Sbjct: 161 WRPITEQLANIKDASYQAFAQRLHF 185


>AJ512339-1|CAD54512.1|  674|Caenorhabditis elegans trehalase
           protein.
          Length = 674

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 78  WKSLTEQLINYMDENIHFISKRIHF 152
           W+ +TEQL N  D +    ++R+HF
Sbjct: 161 WRPITEQLANIKDASYQAFAQRLHF 185


>Z72505-2|CAA96609.1|  340|Caenorhabditis elegans Hypothetical
           protein C50C10.3 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 239 TVFTLITKFCNVVQSKIIDIYVKMKYELAKMYTLTNEM--NIFVHVI 105
           T       F  ++ + +I I + MKY  AKM   T  M  NIFV ++
Sbjct: 27  TTMQAFVPFIYIIPTSVIMIVILMKYRTAKMMMNTASMDPNIFVTIM 73


>AF026213-4|AAB71305.2|  458|Caenorhabditis elegans Cell death
           abnormality protein 8 protein.
          Length = 458

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +1

Query: 127 ISLVSVYILASSYFIFT*MSMIFD-CTTLQNLVINVNTVIHL 249
           + L+SV++L +   +    ++  D CT ++ L++ +NT IH+
Sbjct: 290 VPLISVHLLVTLVHVIFLQAIHIDACTHIEKLLLLINTFIHI 331


>Z92813-7|CAB07283.2|  758|Caenorhabditis elegans Hypothetical
           protein T28A8.7 protein.
          Length = 758

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 326 KSHEKFHFKNCDLLITKQYRNRSRLLRWMTVFTLITKFCNVVQ 198
           K+H +FHF++ ++L  +   N S+ LR M   +      NV Q
Sbjct: 495 KTHREFHFESIEVLRKEIIANSSQSLREMFKTSTFVGSINVKQ 537


>Z83218-3|CAB05688.1|  330|Caenorhabditis elegans Hypothetical
           protein C31A11.6 protein.
          Length = 330

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = +1

Query: 172 FT*MSMIFDCTTLQNLVINVNTVIHLKSRDRFLYCLVISKSQFLK*NFSCDFQRDCVKR 348
           FT ++ I+  TTL  LVINV  ++HLK+     Y  +  KS  +    S    +  +KR
Sbjct: 176 FTNINAIWVPTTL--LVINVLMMLHLKAHRYDFYTRIRQKSSVISMLSSSSLAQSQLKR 232


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = -1

Query: 236 VFTLITKFCNVVQSKIIDIYVKMKYELAKMYTLTNEMNI 120
           +F  IT+F  +  +  I I + + YEL K+++L++  NI
Sbjct: 104 MFKTITRFSVITATTSITIILLIFYELFKIWSLSHVPNI 142


>AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical
           protein F42G2.2 protein.
          Length = 560

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 193 FDCTTLQNLVINVNTVIH 246
           FD TTL  L IN++++IH
Sbjct: 154 FDATTLTELNINIHSIIH 171


>AC087078-1|AAG37943.1|  198|Caenorhabditis elegans Hypothetical
           protein Y34F4.2 protein.
          Length = 198

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 245 WMTVFTLITKFCNVVQSKIIDIYVKMKYELAKMYTLTNEM-NIFV 114
           W+ V ++     N++  +  +   +MK +L K+Y LT+E+ N FV
Sbjct: 142 WLLVASICISPFNILVVRRFEESAEMKQKLTKIYPLTSEIPNDFV 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,094,126
Number of Sequences: 27780
Number of extensions: 162521
Number of successful extensions: 382
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)