Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E16
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00044-4|AAY44000.1|  212|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine re...    29   4.4  

>U00044-4|AAY44000.1|  212|Caenorhabditis elegans Hypothetical
           protein K04C2.7 protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 564 ITFFYTVSSVIIHQEFIKECLSVMM*NKVFFLNKNPRRT 448
           +TFF  V  V+    F +   SV + NK+F+ + N  R+
Sbjct: 25  VTFFALVQLVVASVSFAQHIYSVALFNKIFYCSFNETRS 63


>AF067607-7|AAF98613.1|  433|Caenorhabditis elegans Serpentine
           receptor, class t protein59 protein.
          Length = 433

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 216 CVRIFNESCLFVYRCGAPHPFCFN 145
           C R  N  C  V+RC  PH + +N
Sbjct: 74  CRRFLNPPCDIVFRCFKPHAYYYN 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,393,432
Number of Sequences: 27780
Number of extensions: 321746
Number of successful extensions: 753
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)