Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E16
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   2.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.7  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 606 KPFAIRYDKYSKR 644
           +PF +RYD Y++R
Sbjct: 462 RPFEVRYDPYTQR 474


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 453 RTRIRFQGDNRFAVTRHRNPLSEP 382
           RT+ R  G+ R + T+ R  ++EP
Sbjct: 182 RTKHRLTGETRLSATKGRLVITEP 205


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 651 RTFVYCIYRTGLQRVFKNKQNV 586
           R+  +C    G++R+F + QN+
Sbjct: 147 RSSEFCGKNIGMKRIFTSSQNI 168


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 342 LINLYLPDQSKSFNFVKWKRN 280
           L++LY  DQS++++ ++  RN
Sbjct: 253 LVHLYTRDQSETYDVLRSWRN 273


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 621 GLQRVFKNKQNVTNNAKNWITFFYTVSSVII 529
           G+Q +F  + +    +KN + FF  V++  I
Sbjct: 298 GIQDIFNTQSSAKVMSKNGVLFFGLVNNSAI 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,213
Number of Sequences: 438
Number of extensions: 3849
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)