Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_E14
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 107 6e-24
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 2.4
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 29 3.2
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 28 5.6
Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical pr... 27 9.8
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 163 bits (395), Expect = 1e-40
Identities = 89/188 (47%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Frame = -2
Query: 676 VGDVKTAQGLNDLNQYLAEKXYVXGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 500
V DVK+ GL N LAE+ + G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 499 YTSAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXDVDLFGSGXXXXXXXXXXXXXXR 326
YT AERKTW+ G++P DLFGS R
Sbjct: 62 YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109
Query: 325 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 146
L AYA+KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GY
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGY 169
Query: 145 GIXKLQIM 122
GI KLQI+
Sbjct: 170 GIKKLQII 177
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 107 bits (258), Expect = 6e-24
Identities = 52/89 (58%), Positives = 63/89 (70%)
Frame = -2
Query: 388 DLFGSGXXXXXXXXXXXXXXRLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 209
DLFGS RL AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 208 VRTIEMEGLLWGASKLVPVGYGIXKLQIM 122
VR+IEM+GL+WG +KL+P+GYGI KLQI+
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQII 227
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 466 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIXTRXFSQ 624
P + C QP CM + + VV+ PAP Q + Q +++C+ T+ Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 271 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGIXK----LQIMC 119
SI+L VKP DDE ++++ NQ M G LW A++ Y + L IMC
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMC 484
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 28.7 bits (61), Expect = 4.2
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Frame = +2
Query: 221 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 397
FL+I I +K++ NE +R+LV +I FF S S +FL+ +T N
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344
Query: 398 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRSV*SNLIIPS*YVGKVSGRRLANLL 568
V + R +T +AGA PCF+F S ++ S + VS + +NL+
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTSKEIRKLLSS-KIAAVSSQGSSNLV 395
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 170 LQTCACWVWHKXTANYV 120
LQ CA W+WHK NY+
Sbjct: 187 LQRCA-WLWHKLNENYI 202
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 170 LQTCACWVWHKXTANYV 120
LQ CA W+WHK NY+
Sbjct: 187 LQRCA-WLWHKLNENYI 202
>Z68160-4|CAA92292.1| 583|Caenorhabditis elegans Hypothetical
protein D1046.4 protein.
Length = 583
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/61 (22%), Positives = 31/61 (50%)
Frame = +2
Query: 188 FHFNSAYLVFHFLHIGFIIPWLDIKENRGLGNESWFLRLLVSICFQTFFSNSFSFCILFL 367
FHF+ +++ + + W + ++ + + ++L ++V I F+ SF+ IL L
Sbjct: 391 FHFDIQLILYAAIFAFLSLTWPSVFKSSNIISNKYYLPVMVRIHVVLFYFGSFASNILPL 450
Query: 368 V 370
V
Sbjct: 451 V 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,924,205
Number of Sequences: 27780
Number of extensions: 274585
Number of successful extensions: 784
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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