Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_E11
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 90 9e-19
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 4.1
Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical pr... 28 5.4
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 5.4
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 5.4
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 5.4
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 7.2
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 27 9.5
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 27 9.5
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 90.2 bits (214), Expect = 9e-19
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Frame = -3
Query: 571 PFGYLLDLFRYGVFRGTTTVDDYNCHFWQLRESLQGVEPPAPRSEADFDPAAKYHIA-AD 395
PF D +RY +F GT + N +W++R +GV P P + ++ D ++
Sbjct: 610 PFTIAADNWRYELFDGTVPKNKLNDRWWEIRNKYEGVRSPQPYNTSNLDALIHNSVSQVH 669
Query: 394 VEYMRYYISYIIQFQFHRSLCQLAGEYAVGDSSRLLSNCDIYNSTAAGNALGKMLQLGSS 215
R ISY+++FQ ++LC + + L C + T L + ++LGSS
Sbjct: 670 SPATRTLISYVLKFQILKALCP--------EGTILSEGCILSEDTT--EKLRETMKLGSS 719
Query: 214 KPWPDAMEAITGQRFMDASGVLEYFQPLYDWLKAENERNGEFVGWEPSTVQF 59
W A+E I+G+ +DA +LEY++PL +WL+ NE + VGW+ F
Sbjct: 720 ITWLKALEMISGKGELDAQPLLEYYEPLINWLRNTNEIDQVVVGWDGEGTPF 771
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -1
Query: 324 PGSTRSATPAGCSQTAIFTTARRQETLSAKCCNWVLRSRGPTR---WKR*LDKGSWMPAA 154
P ST A + + + +TA Q+ L + R + R +R L+ G P
Sbjct: 1033 PDSTHPPPLAPRTTSRVLSTAPSQQALQQIQASSPFRRKSMDRNSLSRRFLENGGAQPKT 1092
Query: 153 SWSTSSLYTIGSRPRTNEMENLSVGSLVPSNFVLRTKKQRWKRP 22
WS S+L G+ R+N + VP +++ K+P
Sbjct: 1093 VWSPSALANQGAPRRSNSNLFAATNLEVPPTSTNLSRRHTDKQP 1136
>Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical
protein F17C8.6 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 289 LSNCDIYNSTAAGNALGKMLQLGSSKPWPDAMEAIT 182
L NC N LGKM +GS+ +P + E +T
Sbjct: 130 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLT 165
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 289 LSNCDIYNSTAAGNALGKMLQLGSSKPWPDAMEAIT 182
L NC N LGKM +GS+ +P + E +T
Sbjct: 1636 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLT 1671
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 289 LSNCDIYNSTAAGNALGKMLQLGSSKPWPDAMEAIT 182
L NC N LGKM +GS+ +P + E +T
Sbjct: 1614 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLT 1649
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 289 LSNCDIYNSTAAGNALGKMLQLGSSKPWPDAMEAIT 182
L NC N LGKM +GS+ +P + E +T
Sbjct: 1636 LENCLKNIKAKQNNTLGKMSSIGSTFAFPQSQEVLT 1671
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 142 FQPLYDWLKAENERNGEFVGWEPSTVQ 62
+QP+ + N++NGEF+ W S Q
Sbjct: 3987 YQPMERSVSPRNQQNGEFITWVESNQQ 4013
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 142 FQPLYDWLKAENERNGEFVGWEPSTVQ 62
+QP+ + N++NGEF+ W S Q
Sbjct: 3987 YQPMERSVSPRNQQNGEFITWVESNQQ 4013
>Z47073-4|CAM33507.1| 954|Caenorhabditis elegans Hypothetical
protein ZC506.4b protein.
Length = 954
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 367 YIIQFQFHRSLCQLAGEYAVGDSSRLLSNC 278
+II F+ H+++ + GE + SSR L NC
Sbjct: 880 WIILFEKHKNVRKQEGESMLNKSSRSLGNC 909
>Z47073-3|CAA87374.1| 999|Caenorhabditis elegans Hypothetical protein
ZC506.4a protein.
Length = 999
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 367 YIIQFQFHRSLCQLAGEYAVGDSSRLLSNC 278
+II F+ H+++ + GE + SSR L NC
Sbjct: 925 WIILFEKHKNVRKQEGESMLNKSSRSLGNC 954
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 142 FQPLYDWLKAENERNGEFVGWEPSTVQ 62
+QP+ + N++NGEF+ W S Q
Sbjct: 3987 YQPMERSVSPRNQQNGEFITWVESNQQ 4013
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 324 PGSTRSATPAGCSQTAIFTTARRQETLSAKCCNWVLRSRGPTR---WKR*LDKGSWMPAA 154
P ST A + + + +TA Q+ L + R + R +R L+ G P
Sbjct: 101 PDSTHPPPLAPRTTSRVLSTAPSQQALQQIQASSPFRRKSMDRNSLSRRFLENGGAQPKT 160
Query: 153 SWSTSSLYTIGSRPRTN 103
WS S+L G+ R+N
Sbjct: 161 VWSPSALANQGAPRRSN 177
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.1 bits (57), Expect = 9.5
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = -1
Query: 324 PGSTRSATPAGCSQTAIFTTARRQETLSAKCCNWVLRSRGPTR---WKR*LDKGSWMPAA 154
P ST A + + + +TA Q+ L + R + R +R L+ G P
Sbjct: 1033 PDSTHPPPLAPRTTSRVLSTAPSQQALQQIQASSPFRRKSMDRNSLSRRFLENGGAQPKT 1092
Query: 153 SWSTSSLYTIGSRPRTN 103
WS S+L G+ R+N
Sbjct: 1093 VWSPSALANQGAPRRSN 1109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,637
Number of Sequences: 27780
Number of extensions: 288290
Number of successful extensions: 987
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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