Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_E06
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein. 30 1.7
S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein. 30 1.7
DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor r... 30 1.7
BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor r... 30 1.7
BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor r... 30 1.7
AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor r... 30 1.7
AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor r... 30 1.7
AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein. 30 1.7
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 29 3.0
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 29 3.0
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 29 3.0
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 29 3.0
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 29 3.0
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 29 3.0
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 29 3.0
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 29 3.0
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 29 3.0
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 29 3.0
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 29 3.0
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 29 3.0
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 29 3.0
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 29 3.0
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 29 3.0
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 29 3.0
BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein. 28 9.3
AL445224-3|CAI12937.1| 181|Homo sapiens BET3 like (S. cerevisia... 28 9.3
AL445224-2|CAI12936.1| 167|Homo sapiens BET3 like (S. cerevisia... 28 9.3
AL121953-3|CAI21551.1| 181|Homo sapiens BET3 like (S. cerevisia... 28 9.3
AL121953-2|CAI21550.1| 167|Homo sapiens BET3 like (S. cerevisia... 28 9.3
AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein SB... 28 9.3
AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recogniti... 28 9.3
>X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein.
Length = 274
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 119 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 151
>DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 131
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 67 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 99
>AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 254 GINSAECPPDQYDPGPN--CAFETICALRSAHS 162
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 133 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 166
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 155 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 188
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 184 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 217
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 257 LGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
LG+ CPP PG A + +CA+ S+ KHY
Sbjct: 224 LGVRGLHCPPPPGGPG---AGKRLCAICGDRSSGKHY 257
>BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AL445224-3|CAI12937.1| 181|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 181
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 122 LIRDSIAHKCVKECPKYDEILD 57
L+ D +A CV C Y EI+D
Sbjct: 55 LVEDFLARSCVGRCHSYSEIID 76
>AL445224-2|CAI12936.1| 167|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 122 LIRDSIAHKCVKECPKYDEILD 57
L+ D +A CV C Y EI+D
Sbjct: 41 LVEDFLARSCVGRCHSYSEIID 62
>AL121953-3|CAI21551.1| 181|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 181
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 122 LIRDSIAHKCVKECPKYDEILD 57
L+ D +A CV C Y EI+D
Sbjct: 55 LVEDFLARSCVGRCHSYSEIID 76
>AL121953-2|CAI21550.1| 167|Homo sapiens BET3 like (S. cerevisiae)
protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 122 LIRDSIAHKCVKECPKYDEILD 57
L+ D +A CV C Y EI+D
Sbjct: 41 LVEDFLARSCVGRCHSYSEIID 62
>AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein
SBBI68 protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -1
Query: 243 CGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 100
CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 154 CGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,838,727
Number of Sequences: 237096
Number of extensions: 1001716
Number of successful extensions: 2123
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -