Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_E06
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protei... 33 0.074
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.17
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.17
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.17
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.17
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 0.30
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 31 0.30
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 0.30
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 0.30
U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein. 30 0.40
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 30 0.52
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 30 0.52
Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical p... 29 0.91
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 29 1.2
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 29 1.2
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 28 2.1
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 28 2.1
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 27 2.8
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 2.8
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 27 2.8
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 2.8
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 2.8
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 27 2.8
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 2.8
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 27 2.8
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 2.8
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 27 4.9
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 27 4.9
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 26 6.4
U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical ... 26 6.4
U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified vi... 26 8.5
>AC024744-3|AAK72067.1| 777|Caenorhabditis elegans Cullin protein 3
protein.
Length = 777
Score = 32.7 bits (71), Expect = 0.074
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 190 VSKAQFGPGSYWSGGHSAELIPRHEIMNNKTNQRFILPRFTHSDDSSAGRI 342
+S + GPG SG E P H+I+ T+Q IL +F H + S ++
Sbjct: 575 MSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQL 625
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
C D Y GPNC + +C A C CKPG + + C
Sbjct: 416 CSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPC 461
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKE 84
+C +QY G +C+ C + + C CKPG D+ C K+
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGDNCELACSKD 419
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
CP Y G C + +C+ H +C C+PG + + KC
Sbjct: 676 CPAGSY--GDGC--QQVCSCADGHGCDPTTGECICEPGYHGKTCSEKC 719
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
C D Y GPNC + +C A C CKPG + + C
Sbjct: 416 CSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPC 461
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKE 84
+C +QY G +C+ C + + C CKPG D+ C K+
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGDNCELACSKD 419
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
CP Y G C + +C+ H +C C+PG + + KC
Sbjct: 676 CPAGSY--GDGC--QQVCSCADGHGCDPTTGECICEPGYHGKTCSEKC 719
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
C D Y GPNC + +C A C CKPG + + C
Sbjct: 416 CSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPC 461
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKE 84
+C +QY G +C+ C + + C CKPG D+ C K+
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGDNCELACSKD 419
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
CP Y G C + +C+ H +C C+PG + + KC
Sbjct: 676 CPAGSY--GDGC--QQVCSCADGHGCDPTTGECICEPGYHGKTCSEKC 719
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
C D Y GPNC + +C A C CKPG + + C
Sbjct: 416 CSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPGRTGKNCSEPC 461
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKE 84
+C +QY G +C+ C + + C CKPG D+ C K+
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFYGDNCELACSKD 419
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 236 CPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKC 93
CP Y G C + +C+ H +C C+PG + + KC
Sbjct: 676 CPAGSY--GDGC--QQVCSCADGHGCDPTTGECICEPGYHGKTCSEKC 719
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHY-C-DC----------WCKPGLIRDSIAHK 96
ECP +P P C + L S SN +Y C +C +C G D + K
Sbjct: 826 ECPSLDLNPNPECISTELAVLGSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGK 885
Query: 95 CVKEC 81
C+ EC
Sbjct: 886 CI-EC 889
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 251 INSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCD-CWCKPGLIRDSIAHKCVKE 84
I EC D+ A E C + + + C CK GL+RDS KCV++
Sbjct: 72 IRKPECEGDEELKACGSACEPTCDNENPECDLVCMTNVCQCKKGLVRDSATGKCVEK 128
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHY-C-DC----------WCKPGLIRDSIAHK 96
ECP +P P C + L S SN +Y C +C +C G D + K
Sbjct: 826 ECPSLDLNPNPECISTELAVLGSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGK 885
Query: 95 CVKEC 81
C+ EC
Sbjct: 886 CI-EC 889
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 30.7 bits (66), Expect = 0.30
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 12/65 (18%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHY-C-DC----------WCKPGLIRDSIAHK 96
ECP +P P C + L S SN +Y C +C +C G D + K
Sbjct: 826 ECPSLDLNPNPECISTELAVLGSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLTGK 885
Query: 95 CVKEC 81
C+ EC
Sbjct: 886 CI-EC 889
>U58085-1|AAC47122.1| 780|Caenorhabditis elegans CUL-3 protein.
Length = 780
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 190 VSKAQFGPGSYWSGGHSAELIPRHEIMNNKTNQRFILPRFTH 315
+S + GPG SG E P H+I+ T+Q IL + H
Sbjct: 575 MSNEENGPGPSGSGESMKERKPEHKILQVNTHQMIILLQLNH 616
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -2
Query: 245 SAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKEC 81
S E P + G NC F CA ++ + C CKPG H C + C
Sbjct: 703 SCEKPCPHFTFGKNCRFPCKCARENSEGCDEITGKCRCKPGY----YGHHCKRMC 753
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -2
Query: 245 SAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKEC 81
S E P + G NC F CA ++ + C CKPG H C + C
Sbjct: 703 SCEKPCPHFTFGKNCRFPCKCARENSEGCDEITGKCRCKPGY----YGHHCKRMC 753
>Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical
protein F53C11.9 protein.
Length = 80
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 140 CWCKPGLIRDSIAHKCV--KECPK 75
C CK G + DS KC+ K+CPK
Sbjct: 55 CECKQGFVVDSNTKKCIDLKKCPK 78
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 253 ELTLRNVHRTN-TIRVQIAPSRQSVHYEAHTQTGN 152
ELT +N H N T+ +++ R HYE T TG+
Sbjct: 762 ELTNQNAHNDNFTVSTKMSCQRTICHYEVLTYTGS 796
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 253 ELTLRNVHRTN-TIRVQIAPSRQSVHYEAHTQTGN 152
ELT +N H N T+ +++ R HYE T TG+
Sbjct: 731 ELTNQNAHNDNFTVSTKMSCQRTICHYEVLTYTGS 765
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -3
Query: 277 CYSLFRVSELTLRNVHRTNTIRVQIAPSRQSVHYEAHT 164
C S+ R +T +N +R NT+ +Q+ P + AH+
Sbjct: 655 CPSILR--SVTSKNAYRWNTVHIQLPPGTTHFYLVAHS 690
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -2
Query: 179 LRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKECP 78
L S S+RKH+C W G + K CP
Sbjct: 532 LPSECSDRKHFCSHWKSAGFCEGIFMNYMKKNCP 565
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -2
Query: 308 KRGKMNLWFVLLFIISCLGINS--AECPPDQYDPGPNCAFET--ICALRSAHSNRKHYCD 141
KR + LW LL +IS IN+ A+ P ++ A + + ALR H +H D
Sbjct: 4 KRTRNTLW--LLILISAFAINAEIADDKPPKFQVLRAHATDVPQLKALRDIHERTQHDLD 61
Query: 140 CWCKPGLI 117
W P +
Sbjct: 62 FWQTPSKV 69
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -2
Query: 308 KRGKMNLWFVLLFIISCLGINS--AECPPDQYDPGPNCAFET--ICALRSAHSNRKHYCD 141
KR + LW LL +IS IN+ A+ P ++ A + + ALR H +H D
Sbjct: 4 KRTRNTLW--LLILISAFAINAEIADDKPPKFQVLRAHATDVPQLKALRDIHERTQHDLD 61
Query: 140 CWCKPGLI 117
W P +
Sbjct: 62 FWQTPSKV 69
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 192 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 223
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 192 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 223
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 239 ECPPDQYDPGPNCAFETICALRSAHSNRKHYC 144
ECPPD P + + E+ C +R + R C
Sbjct: 126 ECPPDSIRPPESISKESCCPIRQSCKCRGSIC 157
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Frame = -2
Query: 248 NSAECPPDQYDPGPNCAFET-ICALRSA---HSNRKHYCDCWCKPGLIRDSIAHKCVKEC 81
+ C P Y P NC E IC + H + Y +C CKPG D V E
Sbjct: 1144 DGTSCVP--YAPATNCNLEPRICHANAQCVMHHDTNAY-ECICKPGSSGDGYTKCDVIET 1200
Query: 80 PK 75
P+
Sbjct: 1201 PR 1202
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 229 GGHSAELIPRHEIMNNKTNQRF 294
G H++E + RH +MN NQ+F
Sbjct: 62 GEHASEYVRRHLLMNITKNQKF 83
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -2
Query: 272 FIISCLGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHY 147
F+ G CP P P CA +TICA ++ S+ Y
Sbjct: 18 FMFGGSGGGGCGCPCPVPPPVPICAPQTICAQQAPCSSSSSY 59
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 234 TFRRVNSETRNNE*QNKPKIHLASFHSQ 317
+F + N E RNNE + + +H+ S H +
Sbjct: 333 SFIQYNCEARNNEDEERVLVHIKSCHER 360
>U64842-1|AAB37083.2| 710|Caenorhabditis elegans Hypothetical
protein F25B4.5 protein.
Length = 710
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 216 IVLVRWTFRRVNSETRNNE*QNKPKIH 296
I RWT++ S+T++ E K KIH
Sbjct: 422 IKYARWTWKTYKSKTKSREIYMKAKIH 448
>AF047662-4|AAC04444.1| 145|Caenorhabditis elegans Hypothetical
protein T22B2.6 protein.
Length = 145
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 269 IISCLGINSAECPPDQYDPGPNC 201
+IS G NS CPP G NC
Sbjct: 120 VISKCGPNSCMCPPSYSQCGSNC 142
>U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 3 protein.
Length = 755
Score = 25.8 bits (54), Expect = 8.5
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 172 LRNAQIVSKAQFGPGSYWSGGHSAELIPRHEIMNNKTNQRFILPRFTHSD 321
+RN IV K +YWS G RHE N T L F ++D
Sbjct: 307 VRNRPIVMKTLSFACNYWSSGKLRAYFLRHE--NYTTGLGAFLENFPNAD 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,130,055
Number of Sequences: 27780
Number of extensions: 161492
Number of successful extensions: 507
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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