Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E06
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   0.59 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   4.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   7.3  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   9.6  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 0.59
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 140 CWCKPGLIRDSIAHKCVKECP 78
           C CKPG   D    +C  ECP
Sbjct: 247 CHCKPGYQADVEKQECT-ECP 266



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +1

Query: 184 QIVSKAQFGPGSYWSGGHSAELIPRH 261
           Q  ++   G   + +G HS E  P H
Sbjct: 260 QECTECPIGKFKHEAGSHSCEACPAH 285


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = -2

Query: 146 CDCWCKPGLIRDSIAHKC---VKECPKYDEILD 57
           C   C+PG+I+      C     +C +Y+ + D
Sbjct: 539 CSLPCEPGMIKKQQGDTCCWVCDQCEEYEYVYD 571


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 146 CDCWCKPGLIRDSIAHKCVKECPKYDE 66
           C   C+PG+I+      C   C + +E
Sbjct: 449 CSLPCEPGMIKKQQGDTCCWVCDQCEE 475


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 197 RRNLDPDRIGPVDIPQS 247
           RRN  P   GP D P+S
Sbjct: 55  RRNPGPGSKGPRDFPRS 71


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 138 LVQAWPHKGLYRSQMCER 85
           +V+   H GLY  Q C R
Sbjct: 6   VVRGIEHGGLYYHQRCSR 23


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 282 KPKIHLASFHSQR 320
           +PKIH+ S H  +
Sbjct: 149 RPKIHVFSLHDNK 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,052
Number of Sequences: 438
Number of extensions: 2030
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)