Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_E03
(858 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 34 0.030
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 34 0.030
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 34 0.030
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 34 0.030
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 34 0.030
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 34 0.030
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 34 0.030
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 34 0.030
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 34 0.030
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 34 0.030
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 34 0.030
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo... 28 1.5
SPCPJ732.03 |meu15||sequence orphan|Schizosaccharomyces pombe|ch... 27 3.4
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 27 4.5
SPBC21D10.11c |nfs1||iron-sulfur cluster assembly protein Nfs1|S... 27 4.5
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 26 7.9
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 33.9 bits (74), Expect = 0.030
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = -1
Query: 828 NFIDSREELRKEAKXXIFXVQEXXRXNYXKXMK-------ECTIYKEGDLVAVKRTQFG- 673
+F D +E +E V+E N K K E ++ GDLV VKRT+ G
Sbjct: 1148 SFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF 1207
Query: 672 --TGMKLKPKFLEPYRIVKVKRKSRYNVEKADA 580
KL P F P+ +++ + Y ++ D+
Sbjct: 1208 LHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDS 1240
>SPCC126.09 |||vacuolar membrane zinc transporter
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 418
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 586 SLLNIVSTFSFDLYYSIWFQKLWFQFHSCTKLSPFHSY*VAFLVYSTFFHXLVV 747
+L+ ++T S L YS W + FH K+S F ++ V + FF +V
Sbjct: 76 ALVTGLATSSGILLYSSWASVMQESFHFLEKISMFDTFLVRVFQFCAFFFGGIV 129
>SPCPJ732.03 |meu15||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 150
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 294 LFCLRMIYNFLYNFLYVVRC*CYK-RVTLRTDLRAGRPN 181
+F + M+Y LY LYV C CYK R + RPN
Sbjct: 73 IFIIEMLYYELYLTLYV--CWCYKLRSDFWNEAAKNRPN 109
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 499 VYSVT*VIRPLFHKISRCSSLVRAFNLCVS--LLNIVSTFSFDLYYSIWFQKLWFQFHSC 672
++S+ V+ P+F I L+ F + LLN+++ + + WF + F F
Sbjct: 667 IFSIELVVFPIFCGILLSMCLIGTFKKLAAENLLNVMTVYPAQSIFLAWFIGITFMFEFA 726
Query: 673 TKLS 684
+S
Sbjct: 727 VFIS 730
>SPBC21D10.11c |nfs1||iron-sulfur cluster assembly protein
Nfs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 498
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 114 TAAFTNINLHPSYHAFNKTSFPHSAVLHVSLSSELPFYNTNILQHRESYTKSY 272
TAA T LHP Y F T S + + L S LPF+ T I + S T +Y
Sbjct: 90 TAASTVTGLHPIYMDFQAT----SPLDYRVLDSMLPFF-TGIYGNPHSRTHAY 137
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 235 TSYNIEKVIQKVINHS*TKQLTTITLTSYD*RLNILQQN*LKKNK 369
T+ ++ + I+K++ H +K TLTS + ++ K+NK
Sbjct: 183 TNGDVTRAIEKIVQHGSSKPQKPSTLTSTKSTIKLVSARLKKRNK 227
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,856
Number of Sequences: 5004
Number of extensions: 50784
Number of successful extensions: 132
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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