Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_E03
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical...    32   0.60 
Z81084-2|CAB03107.1|  276|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL117199-2|CAB55041.1|  189|Caenorhabditis elegans Hypothetical ...    28   7.4  
AL117199-1|CAB55038.1|  189|Caenorhabditis elegans Hypothetical ...    28   7.4  

>AC006661-10|AAF39887.1|  843|Caenorhabditis elegans Hypothetical
           protein H20J04.1 protein.
          Length = 843

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 768 QEXXRXNYXKXMKECTIYKEGDLVAVKRTQFGTGMKLKPKF 646
           QE     +    K+  +YK+ DL  V  TQ GTG+ + P F
Sbjct: 234 QEDFTTVFKSVNKKLEVYKKVDLTRVSATQVGTGVAISPFF 274


>Z81084-2|CAB03107.1|  276|Caenorhabditis elegans Hypothetical
           protein F46A9.2 protein.
          Length = 276

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = -1

Query: 642 EPYRIVKVKRKS---RYNVEKADAQVEGPNKTTTSADFMKKWPDYLSD*INRKDEFKIGS 472
           +P +++KV  K    RYN+EK   + E  +    S DF       + D   ++ E K+G+
Sbjct: 166 DPKKLMKVVTKGDGGRYNLEKLLVETETDSIKKISEDFAMILQQGMDDKRTKEQEMKMGN 225

Query: 471 MK 466
           M+
Sbjct: 226 ME 227


>AL117199-2|CAB55041.1|  189|Caenorhabditis elegans Hypothetical
           protein Y43F11A.4 protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 612 KSRYNVEKADAQVEGPNKTTTSADFMKKWPDYLS 511
           +S  N  KA A    P K  TSA+++KK+ +YL+
Sbjct: 8   RSNSNAIKARAPASAP-KRPTSAEYVKKYTEYLA 40


>AL117199-1|CAB55038.1|  189|Caenorhabditis elegans Hypothetical
           protein Y43F11A.1 protein.
          Length = 189

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -1

Query: 612 KSRYNVEKADAQVEGPNKTTTSADFMKKWPDYLS 511
           +S  N  KA A    P K  TSA+++KK+ +YL+
Sbjct: 8   RSNSNAIKARAPASAP-KRPTSAEYVKKYTEYLA 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,030
Number of Sequences: 27780
Number of extensions: 276008
Number of successful extensions: 660
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)