Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D22
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015347-1|AAH15347.1|  176|Homo sapiens chromosome 19 open read...    68   3e-11
BC004533-1|AAH04533.1|  176|Homo sapiens chromosome 19 open read...    68   3e-11
BC000216-1|AAH00216.1|  176|Homo sapiens chromosome 19 open read...    68   3e-11

>BC015347-1|AAH15347.1|  176|Homo sapiens chromosome 19 open reading
           frame 43 protein.
          Length = 176

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 281 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 111
           TL F+GKRRGG    LKTG+V KK K  DE  V  +  DAW+ YM EVKKY+   C ++ 
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169

Query: 110 KTRPLVK 90
           KTRPLVK
Sbjct: 170 KTRPLVK 176


>BC004533-1|AAH04533.1|  176|Homo sapiens chromosome 19 open reading
           frame 43 protein.
          Length = 176

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 281 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 111
           TL F+GKRRGG    LKTG+V KK K  DE  V  +  DAW+ YM EVKKY+   C ++ 
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169

Query: 110 KTRPLVK 90
           KTRPLVK
Sbjct: 170 KTRPLVK 176


>BC000216-1|AAH00216.1|  176|Homo sapiens chromosome 19 open reading
           frame 43 protein.
          Length = 176

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
 Frame = -1

Query: 281 TLPFIGKRRGGR--VLKTGLV-KKAKAIDEQCVDNTPKDAWSLYMQEVKKYRETSCEEER 111
           TL F+GKRRGG    LKTG+V KK K  DE  V  +  DAW+ YM EVKKY+   C ++ 
Sbjct: 112 TLSFVGKRRGGNKLALKTGIVAKKQKTEDE--VLTSKGDAWAKYMAEVKKYKAHQCGDDD 169

Query: 110 KTRPLVK 90
           KTRPLVK
Sbjct: 170 KTRPLVK 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,661,401
Number of Sequences: 237096
Number of extensions: 1765161
Number of successful extensions: 4513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4503
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)