Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_D19
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23647-3|AAK67242.2| 183|Caenorhabditis elegans Hypothetical pr... 63 2e-10
U50191-9|AAK31558.1| 139|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL132904-12|CAC35845.1| 236|Caenorhabditis elegans Hypothetical... 29 3.8
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 27 8.7
U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical pr... 27 8.7
>L23647-3|AAK67242.2| 183|Caenorhabditis elegans Hypothetical
protein ZC262.8 protein.
Length = 183
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = -2
Query: 364 CYMCALGLDVKHT--DVLILSQFVRSDGCMLPKRITGLCKRQQKKIGKMVSMAQKAGLMI 191
C +C + +K T DVLIL QF+R DG +LP+++TGLCK+QQ ++ + V A +GL
Sbjct: 68 CSLCTCNVPIKLTYKDVLILEQFMRDDGTVLPRQLTGLCKKQQLRMERCVMQAFWSGLF- 126
Query: 190 NLTPSNSKKDPTKRKEYKKFNTYF-DETTIFK 98
+ R YK+FN Y+ D+ ++++
Sbjct: 127 ----GDKYGTEADRAGYKRFNRYWKDDMSMYQ 154
>U50191-9|AAK31558.1| 139|Caenorhabditis elegans Hypothetical
protein T14B4.2 protein.
Length = 139
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/66 (28%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = -2
Query: 385 PSSEKP-PCYMCALGLDVKHTDVLILSQFVRS-DGCMLPKRITGLCKRQQKKIGKMVSMA 212
P +++P ++C+ G+++ + + +L QFV + G + + ITGLC +KK+ + ++ +
Sbjct: 46 PYTKEPRKSFLCSTGVELDYKNSRLLQQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKS 105
Query: 211 QKAGLM 194
++AG M
Sbjct: 106 RRAGFM 111
>Z83217-2|CAB05680.2| 319|Caenorhabditis elegans Hypothetical
protein C10C6.3 protein.
Length = 319
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 508 TEGTNLVIEGVTLPSPRTELLVRPPNVTP 422
T+G L ++G T P+P+ L P + TP
Sbjct: 257 TDGNELSLKGATAPTPQKAKLTTPTSTTP 285
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = -2
Query: 571 STTTRVISTTNQLN-IKEIRERTEGTNLVIEGVTLPSPRTELLV-RPPNVTPPLPNIDLS 398
S+TT+ +S +N ++++ + G+ + + P P T+ RPP + PP P +
Sbjct: 1461 SSTTKTLSKWRTVNRYTDVQQFSRGSPI---RTSSPVPSTQTTPSRPPQMPPPPPASGKT 1517
Query: 397 LTKLPSSEKPPCYMCALGLDVKHTDVLILSQFVRSDGCMLPKRI 266
+ PSS P + + + D+LI F+ +PKRI
Sbjct: 1518 IPPPPSSSTP---LVEKLTEDEIQDILICCVFILQ---RMPKRI 1555
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = -2
Query: 571 STTTRVISTTNQLN-IKEIRERTEGTNLVIEGVTLPSPRTELLV-RPPNVTPPLPNIDLS 398
S+TT+ +S +N ++++ + G+ + + P P T+ RPP + PP P +
Sbjct: 1461 SSTTKTLSKWRTVNRYTDVQQFSRGSPI---RTSSPVPSTQTTPSRPPQMPPPPPASGKT 1517
Query: 397 LTKLPSSEKPPCYMCALGLDVKHTDVLILSQFVRSDGCMLPKRI 266
+ PSS P + + + D+LI F+ +PKRI
Sbjct: 1518 IPPPPSSSTP---LVEKLTEDEIQDILICCVFILQ---RMPKRI 1555
>AL132904-12|CAC35845.1| 236|Caenorhabditis elegans Hypothetical
protein Y111B2A.16 protein.
Length = 236
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -2
Query: 445 VRPPNVTPPLPNIDLSLTKLPSSEKPPCYMCALGLDVKHTDVLILSQFVRSDG 287
VRPP P P T + SS+ PP + + L V V + + ++SDG
Sbjct: 7 VRPPMKRGPKPQSFFDDTPVASSDDPPDFESHIVLRVPEDCVGRIEKIIQSDG 59
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -2
Query: 565 TTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDLSLTKL 386
T R+ +T N E RER + V + R EL PP+V P+ S+
Sbjct: 669 TQRISATFNAFESPEERERRRERRMRRRSVE-SNGRVELETPPPSVRSPVVVNKSSVVHA 727
Query: 385 PSSEKPPCYMCALGLD 338
P+S PP + G+D
Sbjct: 728 PAS-SPPVKIRDNGID 742
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 586 KKSILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNV 428
+ +++S R + N +N + + E L IEG LP PR LL R PN+
Sbjct: 431 QNAVMSLQNR-LKMDNDVNAVKFGLKVEAQLLKIEGRVLPVPR--LLYRSPNL 480
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 318 STSVCFTSNPNAHI*HGGFSEDGSLVNERSIFGNGGVTFGGLTSSSVRGEGSVTPSITRF 497
S+S CF + P + G F S + + FG +T SS G GS T+
Sbjct: 304 SSSSCFAAKPTSTSAGGSFGNQPSSFSSKPSFGGAFGASTSVTGSSSMG-GSFGNKSTK- 361
Query: 498 VPSVRS 515
VP V S
Sbjct: 362 VPDVES 367
>U41014-2|AAK32945.1| 182|Caenorhabditis elegans Hypothetical
protein C06G1.2 protein.
Length = 182
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -2
Query: 580 SILSTTTRVISTTNQLNIKEIRERTEGTNLVIEGVTLPSPRTELLVRPPNVTPPLPNIDL 401
+++ TTT V STT ++ E TE T V E T + T V T +
Sbjct: 51 TVVETTTTVDSTTTEV---ETTPTTEATTTVAE-TTTEAETTTTTVESTTTTTEATTTEA 106
Query: 400 SLTKLPSSEKP 368
+ T ++E+P
Sbjct: 107 ATTTTTTTEEP 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,147,867
Number of Sequences: 27780
Number of extensions: 313429
Number of successful extensions: 1106
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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