Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D17
         (665 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0176 - 1403284-1403553,1404313-1404468,1404569-1404787,140...    30   1.4  
01_01_0205 + 1764034-1767601,1767934-1767944                           30   1.9  
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482...    29   3.3  

>11_01_0176 -
           1403284-1403553,1404313-1404468,1404569-1404787,
           1405198-1405440,1405539-1405695,1406186-1406226
          Length = 361

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +2

Query: 32  LKFVCISNLCGNTGLKLLAAC 94
           LK VCI   CGNTG   LA C
Sbjct: 295 LKMVCIFGFCGNTGQVELAKC 315


>01_01_0205 + 1764034-1767601,1767934-1767944
          Length = 1192

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 147 GNE*STICKKDELLVELAHAASNFKPVFPHKLLMQTNFKIIV 22
           GN   +IC    L++ LAH  +NF   FP  L+ QT F+ I+
Sbjct: 834 GNIPHSICNSSLLVLNLAH--NNFSGPFPSCLMEQTYFRNIL 873


>03_01_0658 +
           4818401-4818540,4818605-4819201,4819694-4819949,
           4820038-4820723,4821009-4821147,4821378-4821514,
           4821805-4822077,4822175-4822382,4822660-4822731,
           4823230-4823460,4824269-4824532,4825127-4825268,
           4825355-4825467
          Length = 1085

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 425 ANSENVSVLEQSQTYHCIKNHLFCSHHP-LTKSPQHLTCYFTTFTMKS 285
           A  +N+S L + Q+     N L C  H  L + P  L C   T T K+
Sbjct: 787 ATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQKA 834


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,455,492
Number of Sequences: 37544
Number of extensions: 286557
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)