Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D15
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB74ED Cluster: PREDICTED: similar to gemin 7; n...    38   0.17 
UniRef50_A0F019 Cluster: Gemin 7; n=1; Scophthalmus maximus|Rep:...    37   0.51 
UniRef50_Q9H840 Cluster: Gem-associated protein 7; n=14; Euteleo...    37   0.51 
UniRef50_Q9W4X8 Cluster: CG13761-PB; n=4; Diptera|Rep: CG13761-P...    36   1.2  
UniRef50_UPI0000D56D4E Cluster: PREDICTED: similar to CG7065-PA;...    33   6.3  
UniRef50_UPI000065F20D Cluster: Homolog of Brachydanio rerio "An...    33   8.3  
UniRef50_Q19YB6 Cluster: Gp33; n=2; unclassified Siphoviridae|Re...    33   8.3  

>UniRef50_UPI0000DB74ED Cluster: PREDICTED: similar to gemin 7; n=1;
           Apis mellifera|Rep: PREDICTED: similar to gemin 7 - Apis
           mellifera
          Length = 109

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = -3

Query: 532 LRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDSALLR 353
           LRE FLR I  + G +     YE + + A+F     +  E+    LETP   + + A+LR
Sbjct: 35  LRERFLRVITGIVGKQADFYLYENTRVSAEFRGCDVECLEVYTRNLETPLGKIPE-AVLR 93

Query: 352 TPDLL 338
           T D++
Sbjct: 94  TSDII 98


>UniRef50_A0F019 Cluster: Gemin 7; n=1; Scophthalmus maximus|Rep:
           Gemin 7 - Scophthalmus maximus (Turbot)
          Length = 128

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 24/74 (32%), Positives = 36/74 (48%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A + LRESFLR +  ++  K     +EK  + A F +   D     V  L TP   V   
Sbjct: 55  ARSVLRESFLRCLLSMTDKKVQFHMHEKVKVAATFGASDIDVLNFQVSNLHTP-IGVQKE 113

Query: 364 ALLRTPDLLAIQFE 323
           AL+R  D+++  F+
Sbjct: 114 ALIRCQDVISFTFD 127


>UniRef50_Q9H840 Cluster: Gem-associated protein 7; n=14;
           Euteleostomi|Rep: Gem-associated protein 7 - Homo
           sapiens (Human)
          Length = 131

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A   LRE +LRS+  + G + +   +E   + A F +   D +   V  L+TP  V  + 
Sbjct: 58  ARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAE- 116

Query: 364 ALLRTPDLLAIQFE 323
           ALLR  D+++  F+
Sbjct: 117 ALLRCSDIISYTFK 130


>UniRef50_Q9W4X8 Cluster: CG13761-PB; n=4; Diptera|Rep: CG13761-PB -
           Drosophila melanogaster (Fruit fly)
          Length = 468

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = -3

Query: 424 DGSEILVHGLETPACVVMDSALLRTPDLLAIQFENHLDLP*HYLNLNYCN*CT 266
           +G+E+ VH +E   C+      +   DLL    +  LDL  HY  L  C+ CT
Sbjct: 231 EGNELHVHAIEDMECLDWSKIFISYIDLLNTPEQRRLDLKEHYYFLCVCSKCT 283


>UniRef50_UPI0000D56D4E Cluster: PREDICTED: similar to CG7065-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG7065-PA - Tribolium castaneum
          Length = 1330

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = -3

Query: 532 LRESFLRSIREL---SGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDSA 362
           LRE +L  +  L       C I  +E + +K +  ++  +   I+V  L+TP  V ++ A
Sbjct: 23  LRERYLYLLSSLCVTGAGDCEIKMHENTDVKCRIKAFDSNFENIIVEDLQTPMPVPINKA 82

Query: 361 LLRT 350
           +LRT
Sbjct: 83  ILRT 86


>UniRef50_UPI000065F20D Cluster: Homolog of Brachydanio rerio
           "Ankyrin repeat domain 6.; n=1; Takifugu rubripes|Rep:
           Homolog of Brachydanio rerio "Ankyrin repeat domain 6. -
           Takifugu rubripes
          Length = 187

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 117 CECV*CQDVNAIKRSDFFCIRRMLCCL*G 203
           C+CV C+D    +   FFC R   CCL G
Sbjct: 147 CQCVICRDQRGQEVCFFFCCRFFFCCLIG 175


>UniRef50_Q19YB6 Cluster: Gp33; n=2; unclassified Siphoviridae|Rep:
           Gp33 - Mycobacterium phage PLot
          Length = 288

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 312 SKWFSNCIAKRSGVLNKAESITTHAGVSKPCTNISEPSGFQLL 440
           S WF  CI   SGV++    +TT+   + P   ++EP G Q+L
Sbjct: 186 SGWFGVCIFAFSGVVSVGTPVTTYGSGTSPSQVVTEP-GVQIL 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,831,429
Number of Sequences: 1657284
Number of extensions: 9284511
Number of successful extensions: 20908
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20906
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)