Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D15
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0232 - 13049649-13052807                                         31   0.63 
04_01_0150 + 1741639-1741742,1742432-1742543,1742856-1743594,174...    30   1.5  
03_02_0600 - 9748382-9748933,9749805-9749840,9751164-9751218,975...    29   2.6  
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    28   7.8  

>04_03_0232 - 13049649-13052807
          Length = 1052

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +3

Query: 405  TNISEPSGFQLLNLAFKELFSYVRIVHLNPL-SSLIDLKNDSRNLVAASCSEVEDII--- 572
            T++ +PS     NL F  L    R+VH+ PL SS  +     + L    C  ++D+    
Sbjct: 889  TSLFQPSYNSFENLKFLHLDRCPRLVHVLPLCSSNSNGCRSLKTLEIVCCGALKDVFPLD 948

Query: 573  SSDDIVWRSNNFQKIHSFKFPIVSRI 650
            S   IV+R    ++IH  + P + RI
Sbjct: 949  SDSTIVFR--RLKRIHLHELPKLQRI 972


>04_01_0150 +
           1741639-1741742,1742432-1742543,1742856-1743594,
           1743724-1743776,1743914-1743991,1744107-1744405,
           1744660-1745476,1745576-1745842,1745987-1746181,
           1746287-1746372,1746469-1746657,1747138-1747207,
           1747399-1747552,1747706-1747832,1749158-1749254
          Length = 1128

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 483 HLNPLSSLIDLKNDSRNLVAASCSEVEDIISSDDIVWRSNNFQKIHSFKFPIVSRI 650
           H+ P    +     S +L   S   +E I+ + ++ WR   FQKI SFK   +S +
Sbjct: 294 HMTPPQCQVATAQQS-SLGCDSPQTLEPIVIAGEVDWREEIFQKIKSFKDAYLSEV 348


>03_02_0600 -
           9748382-9748933,9749805-9749840,9751164-9751218,
           9751588-9751697,9751955-9752602
          Length = 466

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 451 KAKFSSWKPDGSEILVHGLETPACVVMDSALLRTPDLLAIQFEN 320
           ++KFS  + +G+  L   + T ACVV+ S  +   D  A Q+ N
Sbjct: 220 RSKFSRLRGNGNAQLEWSITTSACVVVPSISVSRSDYQACQYAN 263


>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
            34512493-34513964,34514114-34514377,34514761-34514978,
            34515759-34516030,34516190-34516559,34516578-34516797,
            34516819-34518931,34518941-34519193,34519269-34519401,
            34520597-34521114,34521207-34522115,34522195-34522368,
            34522833-34522882,34523963-34524035,34524413-34524477,
            34524736-34525522,34525622-34525878,34525989-34526109,
            34526315-34526956
          Length = 5320

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = -3

Query: 535  KLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMD---S 365
            +L  + LR++ E+  F C+ +       +  F S  PD    LV  +   +CV +D   S
Sbjct: 4202 RLNPNELRAVMEILDFMCSGVNQATDGSEDIFDSVIPDDGCRLVSAV---SCVYIDPYGS 4258

Query: 364  ALLRTPDLLAIQFENHLDLP*HYLN 290
             LL   D   I+F  H DLP +  N
Sbjct: 4259 HLLSNIDTSRIRFA-HPDLPQNICN 4282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,379,140
Number of Sequences: 37544
Number of extensions: 248020
Number of successful extensions: 464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)