Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D15
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457321-1|CAG33602.1|  131|Homo sapiens GEMIN7 protein.               37   0.076
BC007793-1|AAH07793.1|  131|Homo sapiens gem (nuclear organelle)...    37   0.076
AY114106-1|AAM44083.1|  131|Homo sapiens gemin 7 protein.              37   0.076
AK024018-1|BAB14780.1|  131|Homo sapiens protein ( Homo sapiens ...    37   0.076
L37378-1|AAA74451.1| 1108|Homo sapiens guanylyl cyclase protein.       31   3.8  
AL031387-4|CAB41303.1| 1108|Homo sapiens guanylate cyclase 2F, r...    31   3.8  

>CR457321-1|CAG33602.1|  131|Homo sapiens GEMIN7 protein.
          Length = 131

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A   LRE +LRS+  + G + +   +E   + A F +   D +   V  L+TP  V  + 
Sbjct: 58  ARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAE- 116

Query: 364 ALLRTPDLLAIQFE 323
           ALLR  D+++  F+
Sbjct: 117 ALLRCSDIISYTFK 130


>BC007793-1|AAH07793.1|  131|Homo sapiens gem (nuclear organelle)
           associated protein 7 protein.
          Length = 131

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A   LRE +LRS+  + G + +   +E   + A F +   D +   V  L+TP  V  + 
Sbjct: 58  ARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAE- 116

Query: 364 ALLRTPDLLAIQFE 323
           ALLR  D+++  F+
Sbjct: 117 ALLRCSDIISYTFK 130


>AY114106-1|AAM44083.1|  131|Homo sapiens gemin 7 protein.
          Length = 131

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A   LRE +LRS+  + G + +   +E   + A F +   D +   V  L+TP  V  + 
Sbjct: 58  ARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAE- 116

Query: 364 ALLRTPDLLAIQFE 323
           ALLR  D+++  F+
Sbjct: 117 ALLRCSDIISYTFK 130


>AK024018-1|BAB14780.1|  131|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13956 fis, clone Y79AA1001185. ).
          Length = 131

 Score = 36.7 bits (81), Expect = 0.076
 Identities = 23/74 (31%), Positives = 38/74 (51%)
 Frame = -3

Query: 544 AATKLRESFLRSIRELSGFKCTILTYEKSSLKAKFSSWKPDGSEILVHGLETPACVVMDS 365
           A   LRE +LRS+  + G + +   +E   + A F +   D +   V  L+TP  V  + 
Sbjct: 58  ARAALRERYLRSLLAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAE- 116

Query: 364 ALLRTPDLLAIQFE 323
           ALLR  D+++  F+
Sbjct: 117 ALLRCSDIISYTFK 130


>L37378-1|AAA74451.1| 1108|Homo sapiens guanylyl cyclase protein.
          Length = 1108

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 390  VSKPCTNISEPSGFQLLNLAFKELFSYVRIVHLNPLSSLIDLKNDSRNLVAA 545
            + K CT   EP GF L+ L F ++  +  I  ++    ++DL ND   L  A
Sbjct: 869  LKKGCT--VEPEGFDLVTLYFSDIVGFTTISAMSEPIEVVDLLNDLYTLFDA 918


>AL031387-4|CAB41303.1| 1108|Homo sapiens guanylate cyclase 2F,
            retinal protein.
          Length = 1108

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 390  VSKPCTNISEPSGFQLLNLAFKELFSYVRIVHLNPLSSLIDLKNDSRNLVAA 545
            + K CT   EP GF L+ L F ++  +  I  ++    ++DL ND   L  A
Sbjct: 869  LKKGCT--VEPEGFDLVTLYFSDIVGFTTISAMSEPIEVVDLLNDLYTLFDA 918


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,334,654
Number of Sequences: 237096
Number of extensions: 1439271
Number of successful extensions: 2250
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)