Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D15
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z70308-9|CAA94346.2|  402|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z78201-4|CAB01590.2|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +3

Query: 471 VRIVHLNPLSSLIDLKNDSRNLVAASCSEVEDIISSDDIVWRSNNFQKIHSFKFPIVSR 647
           +  +H+N       +  +  N +A    + E+++   D++ +  NF K  S KFP + R
Sbjct: 122 IEFMHINNWEERQWISQNFENCIAEELRK-EELLRIGDLMLKCENFDKFLSTKFPTLKR 179


>Z78019-10|CAE46691.1|  911|Caenorhabditis elegans Hypothetical
           protein ZK836.2 protein.
          Length = 911

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +3

Query: 471 VRIVHLNPLSSLIDLKNDSRNLVAASCSEVEDIISSDDIVWRSNNFQKIHSFKFPIVSR 647
           +  +H+N       +  +  N +A    + E+++   D++ +  NF K  S KFP + R
Sbjct: 122 IEFMHINNWEERQWISQNFENCIAEELRK-EELLRIGDLMLKCENFDKFLSTKFPTLKR 179


>Z70308-9|CAA94346.2|  402|Caenorhabditis elegans Hypothetical
           protein F49E11.7 protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 100 TCXQRHVNVFNVRM*ML*KGLIFFASEECCAVFKVSPRFINE 225
           TC + ++N+      M+ +G  FFA ++   +F  +PR++NE
Sbjct: 279 TCKRLNINLIVRAHQMIPEGFKFFADQKLLTIFS-APRYMNE 319


>U80845-2|AAK39179.2|  582|Caenorhabditis elegans Hypothetical
           protein C24A8.1 protein.
          Length = 582

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 409 LVHGLETPACVVMDSALLRTPDLLAIQFEN 320
           L+HG+ET   V+  +A L + DLL ++ +N
Sbjct: 530 LIHGIETRNSVIHSAAYLASVDLLDVREKN 559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,022,686
Number of Sequences: 27780
Number of extensions: 237316
Number of successful extensions: 585
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)