Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D14
         (713 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006A265A Cluster: UPI00006A265A related cluster; n...    33   5.3  
UniRef50_O97298 Cluster: Putative uncharacterized protein MAL3P7...    33   7.0  

>UniRef50_UPI00006A265A Cluster: UPI00006A265A related cluster; n=2;
           Xenopus tropicalis|Rep: UPI00006A265A UniRef100 entry -
           Xenopus tropicalis
          Length = 305

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -3

Query: 168 CTLCTFYHATNFLISFLTS--LYFCRNVKVQYCEILI*HKXVIKYYLFMALLLKCSVM 1
           CT    Y+    L+ + T+  LY+C  V + YC  ++    V+ YY    LL  C+ +
Sbjct: 22  CTTVRLYYCMTVLLYYCTTVLLYYCTTVLLYYCTTVL--LFVLLYYCTTVLLYDCTTV 77


>UniRef50_O97298 Cluster: Putative uncharacterized protein MAL3P7.34;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL3P7.34 - Plasmodium falciparum
            (isolate 3D7)
          Length = 2340

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -2

Query: 703  YNLVIXK*NMYKTVLYLCGKFNLHDT*LLCVDDVVYQF-FELCEELLAKHTLSN--YSDF 533
            Y+++    N+Y T++Y     N+HDT  LC++   Y+     C ++   H   N  Y+++
Sbjct: 2185 YSIMHRDLNIYNTIIYSFNMQNIHDTNNLCINFYFYEIETNRCTDIHMGHVNDNKYYNNY 2244

Query: 532  STK 524
              K
Sbjct: 2245 QNK 2247


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,585,427
Number of Sequences: 1657284
Number of extensions: 11112182
Number of successful extensions: 20735
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20721
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)