Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D14
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    26   0.41 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    26   0.41 
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    26   0.41 
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    26   0.41 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   8.8  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 308 NTISNTKAYNMLHYFTVSYIK 370
           NTI N   Y  L Y+ ++YI+
Sbjct: 310 NTIHNNNNYKKLQYYNINYIE 330


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 308 NTISNTKAYNMLHYFTVSYIK 370
           NTI N   Y  L Y+ ++YI+
Sbjct: 321 NTIHNNNNYKKLQYYNINYIE 341


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 308 NTISNTKAYNMLHYFTVSYIK 370
           NTI N   Y  L Y+ ++YI+
Sbjct: 321 NTIHNNNNYKKLQYYNINYIE 341


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 308 NTISNTKAYNMLHYFTVSYIK 370
           NTI N   Y  L Y+ ++YI+
Sbjct: 310 NTIHNNNNYKKLQYYNINYIE 330


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 317 SNTKAYNMLHYFTVSYIKYDKLTECSSHRV 406
           SNT   N+L +    Y+K  KL +   H +
Sbjct: 336 SNTMFINILKFLKQKYVKNSKLEKVIKHDI 365


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 571 LLAKHTLSNYSDFSTKI*LNN 509
           +LA+ T  N++DFS  I +NN
Sbjct: 471 VLARFTHLNHADFSYTIVINN 491


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +3

Query: 171 YHAYLVFVIKSKYIDS*IKYENIVCLHNT 257
           Y+  +   +KS+Y ++ I+YE I  + NT
Sbjct: 277 YYVNMEPFMKSQYEENNIEYEGIQDIFNT 305


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 305 EHNFEPSDVICWLFKHCIVKTYNI 234
           E N +  D    L+  CI+K +NI
Sbjct: 49  EGNIDVEDKKVQLYCECILKNFNI 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,105
Number of Sequences: 438
Number of extensions: 4278
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)