Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D12
         (656 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000586086 Cluster: PREDICTED: similar to LOC446270 ...    33   4.6  
UniRef50_Q924C5 Cluster: Alpha-protein kinase 3; n=7; Eutheria|R...    33   6.0  

>UniRef50_UPI0000586086 Cluster: PREDICTED: similar to LOC446270
           protein; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to LOC446270 protein -
           Strongylocentrotus purpuratus
          Length = 411

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 126 CGASAGRNKYQPYVQESTHATD-PLIITSLK-NYNLFRYVLSMKVSPPQPAPSRGG 287
           C    GR+K  P++Q   + T+  L++ +L+ NYN  RY L M +   Q  P + G
Sbjct: 184 CFGVEGRSKDLPHLQHLPNTTEFALVLDNLEQNYNSTRYALEMLLVRDQQKPKQSG 239


>UniRef50_Q924C5 Cluster: Alpha-protein kinase 3; n=7; Eutheria|Rep:
            Alpha-protein kinase 3 - Mus musculus (Mouse)
          Length = 1678

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 22/64 (34%), Positives = 36/64 (56%)
 Frame = +3

Query: 177  THATDPLIITSLKNYNLFRYVLSMKVSPPQPAPSRGGAASLAETAFHKSTSSGV*LTDIR 356
            T + DP +I SLKNY L    L +K+S P+ + +R  +  +A+T    S+S+ V   ++ 
Sbjct: 946  TRSCDPGLIDSLKNYLL----LLLKLSSPETSEARAESQEVADTGGLTSSSTLVPTMEVA 1001

Query: 357  LQSP 368
              SP
Sbjct: 1002 GLSP 1005


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,608,296
Number of Sequences: 1657284
Number of extensions: 8098932
Number of successful extensions: 19446
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19435
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)