Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D07
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY0581...    35   1.8  
UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, wh...    34   4.1  
UniRef50_Q4Q3T4 Cluster: Putative uncharacterized protein; n=3; ...    33   5.4  

>UniRef50_Q7RCH0 Cluster: Putative uncharacterized protein PY05812;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05812 - Plasmodium yoelii yoelii
          Length = 667

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 20/56 (35%), Positives = 27/56 (48%)
 Frame = +3

Query: 9   IFSQLFKIIHLKYIYSKFNKKYQCRRDTNKXKYCLITSLVKHIAFSKCNSQNISRE 176
           I  Q  ++  L YIY    K+YQC +D  +    L   L K I + K N +NI  E
Sbjct: 366 IEKQKNQLNRLSYIYEHELKRYQCLKDERRNLEFLNICLYKDIKYKKENIKNIKNE 421


>UniRef50_A0DJ74 Cluster: Chromosome undetermined scaffold_52, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_52, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1841

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = +3

Query: 6    IIFSQLFKIIHL--KYIYSKFNKKYQCRRDTNKXKYCLITSLVKHIA 140
            + F+ L K+ H+  K+I  +FN  ++C+  +++ KY   TS+  ++A
Sbjct: 977  VSFNTLTKLKHMAGKFIKYRFNYNFECKEFSSQLKYTFFTSISSYVA 1023


>UniRef50_Q4Q3T4 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1292

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 633 GLCHYXVVLTXKNITMLHSYLPKLLLTSLFIHTECSLISKLC 508
           G CHY V +T ++   L   L  LL + +F++T  S I  LC
Sbjct: 517 GFCHYPVEVTLESFRDLAKQLVGLLSSPVFVNTSASAIHVLC 558


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,822,523
Number of Sequences: 1657284
Number of extensions: 10205554
Number of successful extensions: 20740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20737
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)