Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D07
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/47 (21%), Positives = 23/47 (48%)
 Frame = -3

Query: 166 MFCELHLLKAMCLTNDVIKQYFXLFVSRLHWYFLLNLL*MYFKCIIL 26
           +F  +HLL  +CL    +   F   +   +  F++  + + F C+++
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI 233



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 107 IFSLICIXSALVFFIEFTINVL 42
           +F L+CI      FI FT+++L
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLL 161


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 132 HIAFSKCNSQNISRERSNKRSKMSL 206
           HI+F  C+S   S++ + +R K  +
Sbjct: 344 HISFMACSSAGCSQKVAEERHKTDI 368


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 49   FIVNSIKNTSADXIQIXENI 108
            F++   K TS + IQ+  N+
Sbjct: 1524 FVIEHKKKTSTEWIQVSNNV 1543


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/47 (23%), Positives = 23/47 (48%)
 Frame = -1

Query: 648 SLKVLGLCHYXVVLTXKNITMLHSYLPKLLLTSLFIHTECSLISKLC 508
           +++VL +C Y V++  K   +  S +    L    +    +L +K+C
Sbjct: 174 AIEVLYICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHNKIC 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,178
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)