Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D01
         (544 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0412 - 3005600-3007759                                           31   0.45 
02_01_0423 - 3092863-3094959                                           31   0.59 
02_01_0413 - 3028946-3031111                                           31   0.59 
02_01_0411 - 2998806-3000938                                           30   1.0  
02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655...    30   1.4  
02_01_0417 - 3048519-3048710,3048903-3050600,3050622-3050909,305...    29   3.2  
02_01_0406 - 2958933-2962076                                           28   4.2  
02_01_0404 - 2945611-2948802                                           28   4.2  
06_03_1488 + 30484904-30485134,30485239-30487159,30487255-304876...    27   7.3  
02_01_0408 - 2972240-2975380                                           27   9.7  

>02_01_0412 - 3005600-3007759
          Length = 719

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS LFT +  F  +TWE + N F  + ++  F+G + S
Sbjct: 158 VLNISSNLFTGA--FPSTTWEKMSNLFAINASNNSFTGYIPS 197


>02_01_0423 - 3092863-3094959
          Length = 698

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNL 27
           VLN SS LFT +  F  +TWE + N  + + ++ RF+G +
Sbjct: 144 VLNISSNLFTGN--FPSTTWERMNNLVVLNASNNRFTGQM 181


>02_01_0413 - 3028946-3031111
          Length = 721

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS LFT +  F  +TWE + N    + ++  FSG++ S
Sbjct: 159 VLNISSNLFTGA--FPSTTWEKMSNLVAINASNNSFSGHIPS 198


>02_01_0411 - 2998806-3000938
          Length = 710

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS  FT +  F  STWE + N    +V++  F+G++ S
Sbjct: 148 VLNISSNQFTGA--FPSSTWEKMSNLVAINVSNNSFTGHIPS 187


>02_03_0406 +
           18663986-18664059,18665082-18665405,18665499-18665559,
           18666136-18666282,18666368-18666492,18666619-18666648,
           18666689-18666893,18667532-18667741,18667886-18667888,
           18670034-18670942,18671239-18672069
          Length = 972

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS LFT +  F  +TWE + N    + ++  F+G++ S
Sbjct: 513 VLNISSNLFTGA--FPSTTWEKMSNLVAINASNNSFTGHIPS 552


>02_01_0417 -
           3048519-3048710,3048903-3050600,3050622-3050909,
           3052308-3052377,3052417-3052668,3053235-3055297
          Length = 1520

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS LFT +  F  +TWE   + F  + ++  F+G + S
Sbjct: 157 VLNISSNLFTGA--FPSTTWEKTSSLFAINASNNSFTGYIPS 196


>02_01_0406 - 2958933-2962076
          Length = 1047

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNL 27
           VLN SS LFT    F  S W+ + N    +V+S +F+G +
Sbjct: 156 VLNISSNLFTGQ--FPSSIWDVMKNLVALNVSSNKFTGKI 193


>02_01_0404 - 2945611-2948802
          Length = 1063

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNLDS 21
           VLN SS  FT    F  +TWE + N  M + ++  F+G++ S
Sbjct: 165 VLNISSNSFTGQ--FPSATWEMMKNLVMLNASNNSFTGHIPS 204


>06_03_1488 +
           30484904-30485134,30485239-30487159,30487255-30487691,
           30487777-30487983
          Length = 931

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/57 (22%), Positives = 29/57 (50%)
 Frame = -1

Query: 334 TIVPITSTILLVLYTPTYTNQILIASCIYLNTFVINVMAVFKSFCRPILRVSRGKQF 164
           T +P++ ++   +    + +Q     C + +  V++  A+ +SF  P   +SRG+ F
Sbjct: 496 TDMPLSVSVSESVPASGFDDQSYTGECKFADANVVSPRALVRSFSAPASGISRGRLF 552


>02_01_0408 - 2972240-2975380
          Length = 1046

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -3

Query: 146 VLNCSSFLFTRSPTFSLSTWEPIGNYFM*SVTSTRFSGNL 27
           VLN SS LF     F  STW+ + N    +V++  FSG++
Sbjct: 158 VLNISSNLFKGQ--FPSSTWKVMKNLVKLNVSNNSFSGHI 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,249,980
Number of Sequences: 37544
Number of extensions: 235886
Number of successful extensions: 421
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)