Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_D01
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024882-5|AAF60932.1|  666|Caenorhabditis elegans Hypothetical ...    34   0.058
Z83231-5|CAB05753.1|  239|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AL023847-9|CAA19553.1|  239|Caenorhabditis elegans Hypothetical ...    29   1.6  
Z80220-3|CAB02306.1|  601|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL023853-1|CAA19558.1|  370|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AC024882-5|AAF60932.1|  666|Caenorhabditis elegans Hypothetical
           protein Y9C9A.8 protein.
          Length = 666

 Score = 34.3 bits (75), Expect = 0.058
 Identities = 13/46 (28%), Positives = 27/46 (58%)
 Frame = -1

Query: 343 YYYTIVPITSTILLVLYTPTYTNQILIASCIYLNTFVINVMAVFKS 206
           ++Y++ P+   +  + Y   Y N+ + + CI+ N FVI +  +F+S
Sbjct: 211 FFYSMYPMVDPLPTIYYVDEYRNEFM-SECIFNNEFVIAIRHLFRS 255


>Z83231-5|CAB05753.1|  239|Caenorhabditis elegans Hypothetical
           protein Y57A10C.1 protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -1

Query: 355 QIQMYYYTIVPITSTILLVLYTPTYTNQILIASCIYLNTFVINVMAVFKSFCRPIL 188
           Q+  Y   I+P    + +VL+      + L     Y N  +I + AVF S C P++
Sbjct: 38  QVVPYIVAILPFLVAVPVVLFIRR--GKALPIQMFYFNQVIIAISAVFLSICLPMI 91


>AL023847-9|CAA19553.1|  239|Caenorhabditis elegans Hypothetical
           protein Y57A10C.1 protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -1

Query: 355 QIQMYYYTIVPITSTILLVLYTPTYTNQILIASCIYLNTFVINVMAVFKSFCRPIL 188
           Q+  Y   I+P    + +VL+      + L     Y N  +I + AVF S C P++
Sbjct: 38  QVVPYIVAILPFLVAVPVVLFIRR--GKALPIQMFYFNQVIIAISAVFLSICLPMI 91


>Z80220-3|CAB02306.1|  601|Caenorhabditis elegans Hypothetical
           protein T08G11.3 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 327 YQLPVLXXXYCTHQHIQTRFSLHHVF 250
           +Q P      C HQH ++RFS  H++
Sbjct: 17  FQEPSTRRALCFHQHCRSRFSFLHIY 42


>Z78200-1|CAB01579.1|  377|Caenorhabditis elegans Hypothetical
           protein T04H1.1 protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 343 YYYTIVPITSTILLVLYTPTYTNQIL 266
           ++   + ++ +ILL+ Y+P Y NQ+L
Sbjct: 173 WFNAFMDLSMSILLITYSPIYFNQVL 198


>AL023853-1|CAA19558.1|  370|Caenorhabditis elegans Hypothetical
           protein Y71A12C.1 protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 531 PADAVLLPIQLPSNKNRFVKCC*FSILFQIS 439
           PADA+L+P++  + K +   C  +S+L QI+
Sbjct: 121 PADAILIPVKYSAKKLQNPTCHHWSLLNQIT 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,383,781
Number of Sequences: 27780
Number of extensions: 242745
Number of successful extensions: 510
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)