Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C24
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical...    27   9.2  

>AF067949-2|AAC19235.1|  357|Caenorhabditis elegans Hypothetical
           protein T10H9.1 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 28/89 (31%), Positives = 37/89 (41%)
 Frame = -3

Query: 472 LIYSQFDHRRQEQKFDNK*IVCIFVSL*CLLQFFRPFFIFLSYSNNFQRLFLN*PFWYCS 293
           LI+S F  RR  Q    K  + +F +   +  FF  FF   +Y N F R  LN P W   
Sbjct: 39  LIWSAF--RRSPQLL-TKHHLYLFYAF-AVTNFFTGFFTIPTYLNLFYRNNLNCPRWSIL 94

Query: 292 ATLI*QISKDTFSHTETVLIPLPSISTIF 206
                +I  D   H  T+ I    I  +F
Sbjct: 95  IGSSFEIGLDKVRHIITLSIAAERIFALF 123


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
            protein ZK1251.9 protein.
          Length = 1701

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 225  PPYRLYLQHLLATLNYVSNVT-YLSLN*LDRPXLK 124
            PP+ L+ QH    L+Y +NV   +SL  LD+  L+
Sbjct: 1025 PPFSLFYQHKCPELSYQTNVVRNISLRTLDQELLR 1059


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
            ZK1251.9 protein.
          Length = 1701

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 225  PPYRLYLQHLLATLNYVSNVT-YLSLN*LDRPXLK 124
            PP+ L+ QH    L+Y +NV   +SL  LD+  L+
Sbjct: 1025 PPFSLFYQHKCPELSYQTNVVRNISLRTLDQELLR 1059


>AF016449-14|AAG23991.1|  517|Caenorhabditis elegans Hypothetical
           protein C50H11.1 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 42  IFHSHGIIFSPHC 80
           IFH+HG+ FS HC
Sbjct: 227 IFHAHGLYFSLHC 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,775
Number of Sequences: 27780
Number of extensions: 243218
Number of successful extensions: 501
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)