Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_C21
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 39 0.003
12_02_0911 + 24236374-24237582 35 0.063
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 33 0.19
03_05_0650 - 26423829-26424179,26424379-26424612,26424961-264252... 31 1.0
04_01_0167 + 1864956-1865495 30 1.8
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 29 2.4
03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551 29 2.4
09_02_0549 + 10485415-10486107 29 3.1
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348... 29 3.1
01_06_1162 + 35010414-35011106 29 4.1
04_01_0363 + 4754650-4755912 28 5.4
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 28 7.2
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 28 7.2
11_04_0154 + 14172294-14172459,14172993-14173054,14174781-141748... 27 9.5
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110... 27 9.5
06_03_0685 - 23499779-23500204 27 9.5
03_02_0316 - 7408003-7409340 27 9.5
>12_01_0039 -
319871-319914,320021-320084,320198-320263,320397-320458,
321211-321298,321401-321461,321542-321625,322332-322630
Length = 255
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = -1
Query: 543 ALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 364
A+E AL LE V + + + S ND L D++ EFL+EQ + + ++ + L++
Sbjct: 178 AMELALALEKLVNEKLHN-LHSVASRCNDPQLTDFVESEFLEEQVEAIKKISEYVAQLRR 236
Query: 363 MMDKHAALGEFIFDKKLL 310
+ H G + FD+KLL
Sbjct: 237 VGKGH---GVWHFDQKLL 251
>12_02_0911 + 24236374-24237582
Length = 402
Score = 34.7 bits (76), Expect = 0.063
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -1
Query: 603 VTNLITYRAPAXTSW--ESGASALEHA--LKLESDVTNSIREVIKTCESSFNDYHLVDYL 436
VTNL+ R A ++GA+A + A L+L+ S +EV +H+ D+L
Sbjct: 152 VTNLLLLRLKARNQQVVDAGAAAPQEAALLQLQQQTPASCQEVFVRSHGEEYGFHVDDFL 211
Query: 435 SGEFLDEQYKGQRDL 391
S +EQY G L
Sbjct: 212 SDACSNEQYSGDSSL 226
>11_01_0040 -
304439-304482,304589-304652,304766-304831,305509-305640,
305744-305804,305885-306018,306310-306654
Length = 281
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -1
Query: 471 SSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMMDKHAALGEFIFDKKLL 310
S ND L D++ EFL+EQ + + ++ + L+++ H G + FD+KLL
Sbjct: 227 SRCNDPQLTDFVESEFLEEQVEAIKKISEYVAQLRRVGKGH---GVWHFDQKLL 277
>03_05_0650 -
26423829-26424179,26424379-26424612,26424961-26425236,
26425372-26425648,26425751-26425764,26425843-26425989,
26426306-26426366,26426570-26426604,26426688-26426882,
26428230-26428439,26428865-26428940,26429519-26429799
Length = 718
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 534 HALKLESDVTNSIREVIK-TCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKK 364
H L V S +E I T ES F YH+ YLS + + + K Q+ + G KK
Sbjct: 141 HFTVLVRGVPKSTKESISCTVESFFTKYHVSSYLSHQIIYKVGKLQKIVTGAKKAYKK 198
>04_01_0167 + 1864956-1865495
Length = 179
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Frame = -3
Query: 634 PAHEGQADRLRNQPHHVQGPRXHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRL 455
P GQ HH P HVVGE + P +A R + Q R +R+
Sbjct: 61 PRRAGQRSSTAAPRHHRPSPALHVVGE-LVPPGDAEEARGLRPRDLDRPRQ-ARHDHRRV 118
Query: 454 PPGRLLVRGIPRRTVQGPARPRRQGLDPQEDDGQA----RRPRRVHLRQETPR 308
G +V P V + + DG+A RRPR +R E R
Sbjct: 119 VVGDAVVGAEPLDVVLAEEAKGGHAKEGEPRDGEAGGELRRPRVAEVRHEARR 171
>03_06_0766 - 36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 501 SIREVIKTCESSFNDYHLVDYLSGEFLDEQYKGQRDLAGKASTLKKMM-DKHAALGEFIF 325
S++++ K C ++D + + +S E L+E TLK +M +K A+ G F+
Sbjct: 1356 SVQQLYKICTQYWDDKYNTESVSEEVLNEMKTLMNGKDASDGTLKSLMNEKDASDGTFLL 1415
Query: 324 DKKL 313
++++
Sbjct: 1416 NEEI 1419
>03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551
Length = 589
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 552 GASALEHALKLESDVTNSIREVIKTCESSFNDYHLV 445
G LE+ +D+TN+ E I T SS ND+ LV
Sbjct: 381 GCPHLEYWAVHVTDITNAALEAIGTYSSSLNDFRLV 416
>09_02_0549 + 10485415-10486107
Length = 230
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -3
Query: 601 NQPHHVQGPRXHVVGERRISPRARPQA--GE*RHQQHPGGHQDLREQLQRLPPGRLLVRG 428
N+ +VQ P ++ + + R P A +HQ+ G +L G L+R
Sbjct: 97 NRHLNVQPPPQRIIVKGTVKGRIVPPAIVSSLQHQRQQGKQCQENNSSLQLQRGSTLLRQ 156
Query: 427 IPRRTVQGPARP 392
PR+ + P RP
Sbjct: 157 HPRQVLSAPGRP 168
>02_01_0485 +
3487578-3487635,3488281-3488399,3488600-3488698,
3488795-3488851,3488954-3489109,3489227-3489311,
3489489-3489579,3489693-3489857,3489923-3490045,
3490244-3490319,3490486-3490633,3490769-3491934,
3492041-3492231,3492321-3492513
Length = 908
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 622 GQADRLRNQPHHVQGPRXHVVGERRISPRARPQAGE*R-HQQHPGGHQDLREQ 467
G + + +QP ++Q P H P+ +PQ + HQQ P HQ +++Q
Sbjct: 502 GNSIQGHSQPEYLQQPLQHCQSFNEQKPQLQPQQQQQESHQQQP-QHQQMQQQ 553
>01_06_1162 + 35010414-35011106
Length = 230
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -3
Query: 601 NQPHHVQGPRXHVVGERRISPRARPQA--GE*RHQQHPGGHQDLREQLQRLPPGRLLVRG 428
N+ +VQ P ++ + + R P A +HQ+ G +L G L+R
Sbjct: 97 NRHLNVQPPPQRIIVKGTVKGRIVPPATVSSLQHQRQQGKQCQENNSSLQLQRGGTLLRQ 156
Query: 427 IPRRTVQGPARP 392
PR+ + P RP
Sbjct: 157 HPRQVLSAPGRP 168
>04_01_0363 + 4754650-4755912
Length = 420
Score = 28.3 bits (60), Expect = 5.4
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -3
Query: 586 VQGPRXHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPR---- 419
++GP GER + R QAG R Q+ GG + PP + G R
Sbjct: 1 MRGPPVSGSGERE---KGRRQAGPTR-QRRTGGRSTVDRDHVGGPPPVHGIDGPDRPGAD 56
Query: 418 RTVQGPARPRRQGLDPQEDDGQARRPRRVHLRQE 317
RTV+ R G +P Q RR RVH R++
Sbjct: 57 RTVRRRPGSARLGTNPAGRPWQGRRHVRVHRRRQ 90
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 454 PPGRLLVRGIPRRTVQGPARPRRQG-LDPQEDDGQARRPRRVHL 326
PPG VR P++ Q P PRR+ P R P R HL
Sbjct: 118 PPGFAGVRQPPQKQQQLPPPPRRRAQQQPASAAAHHRNPNRHHL 161
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 480 TCESSFNDYHLVDYLSGEFLDEQY-KGQRDLAGKASTL-KKMMDKHAALGEFI 328
TC+SSFND + + ++G E + K Q DL + + KK D+ + EF+
Sbjct: 401 TCDSSFNDKPIRETVAGPLGKELFEKEQEDLLSDLNDIPKKACDRR--INEFV 451
>11_04_0154 +
14172294-14172459,14172993-14173054,14174781-14174859,
14174964-14175164,14175420-14175610
Length = 232
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 592 HHVQGPRXHVVGERRISPRAR 530
H+ GPR H+ G RR PRAR
Sbjct: 18 HYATGPRTHLPGPRR-KPRAR 37
>11_03_0150 +
10810322-10810380,10810530-10810593,10810803-10811047,
10811627-10811747,10811821-10811895,10811986-10812112,
10812194-10812939,10813065-10813195,10813547-10813636,
10814000-10814105
Length = 587
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = -3
Query: 568 HVVGERRISPRARPQAGE*RHQQHPGGHQDLREQLQRLPPGRLLVRGIPRRTVQGPARPR 389
H ++ +S RPQ+ + + Q Q + +Q P + L +G RR Q P R
Sbjct: 338 HSASKQLLSQNGRPQSSQSQRMQSTSHGQRPHQPVQSQWPLQSL-QG--RRPQQSPQNTR 394
Query: 388 RQGLDPQEDDGQARRPRRVHLRQETPRIE 302
Q + + Q+ + +R L + R+E
Sbjct: 395 PQLMSKSQRPQQSLQRQRPQLSSQNERLE 423
>06_03_0685 - 23499779-23500204
Length = 141
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -3
Query: 469 QLQRLPPGRLLVRGIP---RRTVQGPARPRR-QGLDPQEDDGQARRPRRVHLR 323
+++R PP R +RG+P R + P R R GL P+ RRP+ H R
Sbjct: 47 RIRRWPPRRGRIRGLPPLGGRICRRPPRGGRIHGLPPRGGRIHRRRPQGRHRR 99
>03_02_0316 - 7408003-7409340
Length = 445
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 384 KASTLKKMMDKHAALGEFIFDKKLLGLN 301
KA+ L KM++KH LGE + GLN
Sbjct: 415 KATELLKMLNKHKGLGECVDAVDFRGLN 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,385,305
Number of Sequences: 37544
Number of extensions: 282971
Number of successful extensions: 754
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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