Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_C19
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 114 7e-26
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 99 3e-21
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 70 2e-12
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 39 0.004
U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 29 2.6
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 114 bits (274), Expect = 7e-26
Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Frame = -3
Query: 739 AAHCTRRWDAXELY-VRLGEYDXQRXXDSRXYNFKVVEKIQHPNFELSSYHNDIAILKLH 563
AAHC + Y V +G++D + + + +++I + +DIAIL++
Sbjct: 67 AAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFY--LQRIHFYPLYKDIFSHDIAILEIP 124
Query: 562 RPAV-FNTYVWPICLPPADLDLT-NEIATVIGWGTQWYGGPHSNVLMEVSVPVWDHQKCV 389
P + FN Y PICLP D T V GWG+ G ++ L +P+ + CV
Sbjct: 125 YPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSM--GLRYAERLQAALIPIINRFDCV 182
Query: 388 EA--FVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVSWGLRCGEPNH 215
+ S+ CAG LEGG D+CQGDSGGP + G + + GV+SWG C +
Sbjct: 183 NSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQ 242
Query: 214 PGLYARVDKYLDWI 173
PG+Y V YL WI
Sbjct: 243 PGIYTMVAPYLSWI 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 99.1 bits (236), Expect = 3e-21
Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Frame = -3
Query: 619 HPNFEL---SSYHNDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGG 449
HP + + SSY D AI+++H P +T PICLP + N + V GWG+ G
Sbjct: 133 HPWYNIGFPSSY--DFAIMRIHPPVNTSTTARPICLPSLPA-VENRLCVVTGWGSTIEGS 189
Query: 448 PHSN-VLMEVSVPVWDHQKC--VEAFVDSVFTETV-CAGGLEGGKDACQGDSGGPLMYQM 281
S L E+ VP+ C + ++ + ++ CAG G D+CQGDSGGPLM
Sbjct: 190 SLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCAR 249
Query: 280 SSGRWAVVGVVSWGLRCGEPNHPGLYARVDKYLDWILL 167
G W + GVVSWG+ C P PG+Y V WI L
Sbjct: 250 D-GHWELTGVVSWGIGCARPGMPGVYGNVHSASTWINL 286
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 70.1 bits (164), Expect = 2e-12
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Frame = -3
Query: 739 AAHCTRRWDAXELYVRLGEYDXQRXXDSRXYNFKVVEKIQHPNFELSSYHNDIAILKLHR 560
AAHC A +L R Y + ++R +F V E H + + NDIA+L++
Sbjct: 79 AAHC-----ALQLQTRSFVY-VREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISS 132
Query: 559 PAVFNTYVWPICLPPADLDLTNEI--ATVIGWGTQW----YGGP---HSNVLMEVSVPVW 407
+ + P+CL D L + VIG+G G P +S L SVP+
Sbjct: 133 D-LSKLGIKPVCLVHDDSKLLKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPII 191
Query: 406 DHQKCVEA--FVDSVFTET----VCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVS 245
CV+ F+ + + +CAG G GDSGGPL+ S+G + +G+ S
Sbjct: 192 SDDDCVKTWRFLSLLSVKITGYQICAGAYLHG--TAPGDSGGPLLIHKSNGEYVQIGITS 249
Query: 244 WGLR-----CGEPNHPGLYARVDKYLDWI 173
+G + PG+Y R+ KY+ WI
Sbjct: 250 YGADGLDGVIDQGKFPGVYTRISKYVPWI 278
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 52.0 bits (119), Expect = 4e-07
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = -3
Query: 589 NDIAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPV 410
+D AI+++ + F+ V PICLP ++ T +A V GWG + S L+ +P+
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPRPNMYYTKSLA-VPGWGRIFN---ESGPLIH-EIPM 197
Query: 409 WDHQKCVEAFVDSVFTET---VCAGGLE----GGKDACQGDSGGPLMYQMSS-GRWAVVG 254
+ C + D + + +CA + C GDSGG L Y+ + GR ++
Sbjct: 198 RIDRDCKRPWSDRLPADADDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIA 257
Query: 253 VVSWGLRCGEPNHPGLYARVDKYLDWI 173
+ S+G R N + RVD YL+ I
Sbjct: 258 ITSFGTRGCPSNMLARFTRVDMYLNLI 284
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 41.5 bits (93), Expect = 6e-04
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = -3
Query: 589 NDIAILKLHRPAVFNTYVWPICLPPA-DLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVP 413
NDIA+ +L P F+ ++P CLP A + E G+ YG S+ ++E
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRE----TGYKLFGYGRDPSDSVLESGKL 176
Query: 412 VWDHQKCVEAFVDSVFTETVCAGGLEGGKDACQGDSG-GPLMYQMSSGRWAVVGVVSWGL 236
+ E D + C + G +C GDSG G + + +VGV+S G+
Sbjct: 177 KSLYSFVAECSDDFPYGGVYCTSAVNRGL-SCDGDSGSGVVRTSDTRNVQVLVGVLSAGM 235
Query: 235 RCGE 224
C E
Sbjct: 236 PCPE 239
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Frame = -3
Query: 589 NDIAILKLHRPAVFNTYVWPICLP--PADLDLTNEIATVIGWGT---QWYGGPHSNVLME 425
NDI IL+L CLP P + T GWG+ + + ++
Sbjct: 176 NDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQV 235
Query: 424 VSVPVWDHQKCVEAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMS-SGRWAVVGVV 248
+++ C E + S+ ++ C E K+ C GDSGG L + S S R ++ +V
Sbjct: 236 LTLATETLATCEENWGTSIPFDSFCTAE-EEDKNVCSGDSGGGLTFHQSDSAREFIIAIV 294
Query: 247 SWGLRC 230
S+G C
Sbjct: 295 SYGSDC 300
>U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical
protein T21E12.3 protein.
Length = 162
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -3
Query: 352 CAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVSWGLRC 230
C + + AC GDSGG ++ Q+ + R VVGV+ G+ C
Sbjct: 62 CTKSISKNQLACTGDSGGGVV-QLINDRVTVVGVIYEGVTC 101
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Frame = -3
Query: 583 IAILKLHRPAVFNTYVWPICLPPADLDLTNEIATVIGWGTQWYGGPHSNVLMEVSVPVWD 404
+ IL+L +P N +WP+C+ D L + + G G +S +
Sbjct: 166 VLILELKKPLELNPSIWPVCI-SNDPQLFDRSSDFSVSGIDAKGVLNSGLF--------- 215
Query: 403 HQKCVEAFVDSVFTETVCAGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGV-VSWGLRC 230
K V V+ F+ CA ++ + C DSGG + + SG+ V+GV V+ + C
Sbjct: 216 --KPVNCSVEGPFS---CAEAVDNKQRMCAYDSGGSAISNV-SGQNTVLGVYVTGNMNC 268
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -1
Query: 423 CRYLFGITRNA*RRSSIPCSPKPFAL---VDSKAERMPVRAIAEVR*CTRCQV 274
C L RN SS+ PK FAL +D K R+P IA++R CQ+
Sbjct: 171 CVILCPFCRNETNVSSVASLPKNFALLQAIDQKTLRVPPLEIAKLRQQLSCQL 223
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 349 AGGLEGGKDACQGDSGGPLMYQMSSGRWAVVGVVS 245
A + G AC GDSG P +Y +G+ +VG V+
Sbjct: 200 AKAVTGSSRACMGDSGSP-VYCFVNGKRILVGTVA 233
>Z98860-2|CAB11545.1| 337|Caenorhabditis elegans Hypothetical
protein Y26G10.2 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = -1
Query: 543 HMFG--QFVYRLQIWILLMKSLQSLDGELSGTVVL---TATCSWKCRYL 412
H+FG F+Y L +++L K+ ++ G L +V + TC W C +L
Sbjct: 25 HIFGLFTFLYPLTYYVVLFKTPKNF-GSLKWFLVFHIFSITCQWLCSFL 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,653,521
Number of Sequences: 27780
Number of extensions: 346831
Number of successful extensions: 868
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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