Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C13
         (775 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4WNM7 Cluster: Longevity-assurance protein (LAC1), put...    36   1.5  
UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    35   2.6  
UniRef50_Q8WPM5 Cluster: Similar to transmembrane receptor; n=1;...    34   3.4  
UniRef50_A2QHP6 Cluster: Contig An04c0030, complete genome; n=1;...    33   6.0  
UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3; Oe...    33   6.0  
UniRef50_P21422 Cluster: DNA-directed RNA polymerase beta' chain...    33   7.9  

>UniRef50_Q4WNM7 Cluster: Longevity-assurance protein (LAC1),
           putative; n=6; Trichocomaceae|Rep: Longevity-assurance
           protein (LAC1), putative - Aspergillus fumigatus
           (Sartorya fumigata)
          Length = 467

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = -3

Query: 716 LIXLHITPFFNLVNIALFMFGLADLILVKTSI*S*KYFKLYCNTDLGKF*ANXYLTIHLY 537
           L   +I  F+N+ N+ L +  + DL+L    I     F+L CN   G F     +T H++
Sbjct: 238 LTSAYIYGFYNVSNVVLCLMDIVDLLLPTAKILKYFKFELCCNITFGLFMVTWLITRHIF 297


>UniRef50_Q699N2 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=1; Schizaphis graminum|Rep: NADH-ubiquinone
           oxidoreductase chain 5 - Schizaphis graminum (Aphid)
          Length = 556

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
 Frame = -2

Query: 576 QILSKXVSYYTFIYFKFQFSNISFSFKYFLDSFN-YYLGSI--LLF*KI--YLNN 427
           +ILS  + +++ I+F F+ +N  FS  YF+  FN ++ G +  LLF KI  +LNN
Sbjct: 440 KILSILILFFS-IWFFFELNNFLFSMSYFISLFNVFFFGMMWNLLFFKINFFLNN 493


>UniRef50_Q8WPM5 Cluster: Similar to transmembrane receptor; n=1;
            Oikopleura dioica|Rep: Similar to transmembrane receptor
            - Oikopleura dioica (Tunicate)
          Length = 1756

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -2

Query: 549  YTFIYFKFQFSNISFSFKYFLDSFNYYLGSILLF*KIYLNNLDSTFKKHVFN 394
            YT  +   Q S +  +F  FLDS  YY+  ++ F  I+L NL S F K + N
Sbjct: 1406 YTLNFEYAQSSILETNFWVFLDSTMYYVFILMPFVIIWLFNLGSNFNKSLIN 1457


>UniRef50_A2QHP6 Cluster: Contig An04c0030, complete genome; n=1;
           Aspergillus niger|Rep: Contig An04c0030, complete genome
           - Aspergillus niger
          Length = 410

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = -3

Query: 704 HITPFFNLVNIALFMFGLADLILVKTSI*S*KYFKLYCNTDLGKF*ANXYLTIHLYTSNF 525
           +I  F+N+ N+ L +  + DL+L    +     ++  CN   G F     +T H+Y    
Sbjct: 222 YIYGFYNVSNVVLSLMDIVDLLLPAAKVLKYLKYETTCNVAFGVFMVTWLITRHIYYPQL 281

Query: 524 NFQTY 510
            +  Y
Sbjct: 282 CWSIY 286


>UniRef50_Q9MTH5 Cluster: Putative membrane protein ycf1; n=3;
            Oenothera|Rep: Putative membrane protein ycf1 - Oenothera
            hookeri (Hooker's evening primrose)
          Length = 2434

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 21/87 (24%), Positives = 43/87 (49%)
 Frame = -2

Query: 303  VF*KAEKKIFDIKVFVIAEFSDKTCRXLTFQISVLREFQNIKSSQLQFFF*RTRYSYFVT 124
            V+ + +K   + K  V     D   + +  + ++L++ + IKS + +F+F R R SY+V 
Sbjct: 1435 VWDEIDKVTKERKKIVFTPKPDSPDKLVQAKKNILKKLERIKSRRHKFYFLRIRKSYYVL 1494

Query: 123  ISLY*LVKKNQLSDSVKNPFENVSSVQ 43
            +     + +N +     NP E   S++
Sbjct: 1495 LFFIKRISRN-IKRIYLNPLERAISIR 1520


>UniRef50_P21422 Cluster: DNA-directed RNA polymerase beta' chain;
           n=6; Plasmodium|Rep: DNA-directed RNA polymerase beta'
           chain - Plasmodium falciparum
          Length = 575

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 573 ILSKXVSYYTF-IYFKFQFSNISFSFKYFLDSFNYYLGSILLF*KIYLNNLDSTFKKHV 400
           +L+K V Y  F IY+K+ FSNI +  +YF   +N     I L+ K Y N +   F  ++
Sbjct: 131 LLNKNVFYLKFLIYYKYFFSNIKYK-QYFY--YNKLFSKINLYKKKYKNIIQYLFSHNI 186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,556,297
Number of Sequences: 1657284
Number of extensions: 11119165
Number of successful extensions: 22520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22494
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)