Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C12
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    24   1.8  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    24   1.8  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    24   1.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.3  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   5.6  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.8  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.8  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 217 GNFYTFSLILFNKYNLQVNFNF*KPLLV 300
           G+ +T ++I F++YN+ V     KPL +
Sbjct: 138 GSIWTMTMIAFDRYNVIVKGLSGKPLSI 165


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 217 GNFYTFSLILFNKYNLQVNFNF*KPLLV 300
           G+ +T ++I F++YN+ V     KPL +
Sbjct: 104 GSIWTMTMIAFDRYNVIVKGLSGKPLSI 131


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 217 GNFYTFSLILFNKYNLQVNFNF*KPLLV 300
           G+ +T ++I F++YN+ V     KPL +
Sbjct: 14  GSIWTMTMIAFDRYNVIVKGLSGKPLSI 41


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 507 TSIWYPLGQISSIHCGSPRRRH 572
           TS+ Y  GQ  S  C +PR  H
Sbjct: 368 TSVHYSNGQTHSQLCPTPRSTH 389


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 179 FSMAFWRLRC 150
           F +AFWRL C
Sbjct: 366 FRLAFWRLTC 375


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 472 YQYNNGY*VENNTRRKR 422
           Y YNN Y   NN   K+
Sbjct: 98  YNYNNKYNYNNNNYNKK 114


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 556 LPQWIEEICPNGYQMDVT 503
           LP W   I P G   D T
Sbjct: 191 LPSWTNNIFPRGELFDAT 208


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 556 LPQWIEEICPNGYQMDVT 503
           LP W   I P G   D T
Sbjct: 206 LPSWTNNIFPRGELFDAT 223


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 556 LPQWIEEICPNGYQMDVT 503
           LP W   I P G   D T
Sbjct: 94  LPSWTNNIFPKGELFDAT 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,077
Number of Sequences: 438
Number of extensions: 4352
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)