Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C09
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   0.60 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   1.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   4.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   4.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   5.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   9.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 153 ILTGKMNRAINIFKKKHLTSKPSFPLTKHAASML 254
           +L G     +N+F   HLT   SFPL       L
Sbjct: 260 VLDGMAANKLNVFHW-HLTDSQSFPLVSQRVPQL 292


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +2

Query: 26  FIYTCFSRFIINRLLTRKSAFSLQIISSCFE 118
           F+Y CF   ++  +L+R      Q+  + +E
Sbjct: 144 FLYNCFHSTLLLMILSRYQRLKAQLWQNRYE 174


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = +1

Query: 10  ESLATLHLHLFLSVHHQPSPHAQIRVLASNHKLMFRTLFYY 132
           ++++T  +   L + H+      +R+   ++KL+F  L YY
Sbjct: 273 QNVSTEVIGNILRLMHRRFEITALRLFTIDNKLLFGVLAYY 313


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 28  HLHLFLSVHHQPSPHAQIR 84
           + H  L  HH P  H QIR
Sbjct: 84  YYHPQLHSHHGPPIHHQIR 102


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 28  HLHLFLSVHHQPSPHAQIR 84
           + H  L  HH P  H QIR
Sbjct: 84  YYHPQLHSHHGPPIHHQIR 102


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 28  HLHLFLSVHHQPSPHAQIR 84
           + H  L  HH P  H QIR
Sbjct: 84  YYHPQLHSHHGPPIHHQIR 102


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 28  HLHLFLSVHHQPSPHAQIR 84
           + H  L  HH P  H QIR
Sbjct: 84  YYHPQLHSHHGPPIHHQIR 102


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
          protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 58 DDEPRETSVNEVLLRIL 8
          ++EPR+  + E+L +I+
Sbjct: 32 ENEPRKQDIGEILQQIM 48


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = +1

Query: 37  LFLSVHHQPSPHAQIRVLASNHKLMFRTLFYYI 135
           ++L +    S + Q+  L +N+K++    F+Y+
Sbjct: 146 IYLILDTIKSKYRQMHRLLANYKVITSDEFFYL 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,105
Number of Sequences: 336
Number of extensions: 1020
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)