Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C09
         (321 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0247 - 21669299-21669348,21669673-21670012,21670110-216701...    27   4.3  
05_03_0259 - 11161447-11161706,11161764-11164266                       27   4.3  
02_03_0167 - 15923872-15925683                                         26   5.7  
03_05_0101 - 20803546-20803800,20803907-20804700,20804788-208050...    26   7.6  

>11_06_0247 -
          21669299-21669348,21669673-21670012,21670110-21670199,
          21670280-21670339,21670564-21670856,21671176-21671245,
          21671623-21671970,21673188-21673318,21673418-21673901,
          21674839-21675558
          Length = 861

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 22 TLHLHLFLSVHHQPSPH 72
          ++HLHL L +HH P  H
Sbjct: 11 SIHLHLHLHLHHPPRLH 27


>05_03_0259 - 11161447-11161706,11161764-11164266
          Length = 920

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 117 NVILLYKNIRGYILTGKMNRAINIFKK 197
           N+I     I G   +GK++RA+N+F K
Sbjct: 769 NIITYNSLIYGLCKSGKLSRAVNLFNK 795


>02_03_0167 - 15923872-15925683
          Length = 603

 Score = 26.2 bits (55), Expect = 5.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 108 HVSNVILLYKNIRGYILTGKMNRAINIF 191
           H++NV++    I GY+  G +N A+ +F
Sbjct: 317 HMANVVVWTSMISGYVEGGHLNEALVMF 344


>03_05_0101 -
           20803546-20803800,20803907-20804700,20804788-20805042,
           20805143-20805263,20805716-20805768,20805979-20806239,
           20806734-20806784,20806900-20807148,20807257-20807479,
           20807737-20807910
          Length = 811

 Score = 25.8 bits (54), Expect = 7.6
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 7   IESLATLH-LHLFLSVHHQPSPHAQI 81
           IE + T+H + +F+S+ H P PH  +
Sbjct: 590 IEKIPTIHSVIVFISMKHLPIPHVDV 615


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,473,914
Number of Sequences: 37544
Number of extensions: 93976
Number of successful extensions: 211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 411066120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)