Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C09
         (321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   1.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   2.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   2.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   6.5  
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    21   8.6  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    21   8.6  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 20  QHFIYTCFSRFIINRLLTRKSA 85
           +H+I  C +R I+N   TRKS+
Sbjct: 251 EHWIPHCGARLILNSNYTRKSS 272


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 13   SLATLHLHLFLSVHHQPSPHAQIRVLASNHKLMFRTLFYY 132
            S+A LH H   ++      H    VL SNH+    T   Y
Sbjct: 1972 SVAPLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALY 2011


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +1

Query: 13   SLATLHLHLFLSVHHQPSPHAQIRVLASNHKLMFRTLFYY 132
            S+A LH H   ++      H    VL SNH+    T   Y
Sbjct: 1973 SVAPLHRHRVENIQKISGDHILSDVLLSNHQSQIITSALY 2012


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 245  INALASWKRLYDNSNYFXLLYA 310
            INA +++K ++  + YF ++ A
Sbjct: 2247 INAASNFKNIFSTNGYFMIMPA 2268


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 98  IISSCFERYSI 130
           I+SSCFE++ I
Sbjct: 48  IVSSCFEKFPI 58


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 98  IISSCFERYSI 130
           I+SSCFE++ I
Sbjct: 48  IVSSCFEKFPI 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,959
Number of Sequences: 2352
Number of extensions: 4144
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)