Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C06
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.8  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   2.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.2  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   7.2  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 456 FLVNVNISYIRFIIITNKYWNIDYENFQSIFI 551
           FL++  +SYI      N ++ I ++ F+S ++
Sbjct: 279 FLLDEKLSYIILTSFLNNFYFIIFQVFESFYL 310


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 279 NNFSRRIEIFSCHFKSGHL 335
           +NFS+ I   +CH+ SGHL
Sbjct: 17  SNFSKFI---NCHYTSGHL 32


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +3

Query: 468 VNISYIRFIIITNKYWNIDYENF 536
           +N+ Y+  +     YW   YE+F
Sbjct: 107 INVLYVLTLCYAVYYWRQQYEDF 129


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 395 CYSLVRKYLCSCK 357
           C  LV  Y C+CK
Sbjct: 315 CVQLVNDYHCNCK 327


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 301 KYLVVTSNPVIFTNLYNKNLQ 363
           K L+V S   +  N+Y KNL+
Sbjct: 46  KNLIVGSENCLVLNVYTKNLR 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,657
Number of Sequences: 336
Number of extensions: 3183
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)