Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C05
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   2.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.4  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = -2

Query: 268 IYQFIGVGNINVLTNLLKNL--NQG 200
           IY F+G+G+ + + +L  NL  NQG
Sbjct: 53  IYSFVGLGDDSRIKHLEPNLDVNQG 77


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 307 IVFNCLKIYHIY 342
           I+F  L+IYHIY
Sbjct: 15  IIFVSLEIYHIY 26


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory
          receptor candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 79 LKLSTLKCNTKVL 41
          L L++LKC TKVL
Sbjct: 10 LDLNSLKCITKVL 22


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory
          receptor candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 79 LKLSTLKCNTKVL 41
          L L++LKC TKVL
Sbjct: 6  LDLNSLKCITKVL 18


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 197 LLICMECYYTNYKKKFKMLIRYQ 129
           +L CM+C     +KK +++ R Q
Sbjct: 59  VLYCMKCECVPLQKKRRIVARVQ 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,443
Number of Sequences: 336
Number of extensions: 2415
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)