Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_C03
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457169-1|CAG33450.1| 178|Homo sapiens HSPC111 protein. 102 1e-21
BC040106-1|AAH40106.1| 178|Homo sapiens hypothetical protein HS... 102 1e-21
AY561704-1|AAS66977.1| 178|Homo sapiens HBV pre-S2 trans-regula... 102 1e-21
AF151875-1|AAD34112.1| 178|Homo sapiens CGI-117 protein protein. 102 1e-21
BC019331-1|AAH19331.1| 231|Homo sapiens HSPC111 protein protein. 68 3e-11
BC032424-1|AAH32424.1| 232|Homo sapiens HSPC111 protein protein. 68 4e-11
BC118982-1|AAI18983.1| 553|Homo sapiens KIAA2012 protein protein. 34 0.58
AB095932-1|BAC23108.1| 555|Homo sapiens KIAA2012 protein protein. 34 0.58
BC119717-1|AAI19718.1| 438|Homo sapiens C1orf67 protein protein. 33 1.0
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 32 2.3
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 32 2.3
AK096141-1|BAC04709.1| 638|Homo sapiens protein ( Homo sapiens ... 32 2.3
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 32 2.3
EF560715-1|ABQ59025.1| 730|Homo sapiens MTSS1 protein protein. 31 3.1
AF086645-1|AAF15947.1| 755|Homo sapiens metastasis suppressor p... 31 3.1
AB007889-1|BAA24859.3| 666|Homo sapiens KIAA0429 protein. 31 3.1
Z37166-1|CAA85523.1| 428|Homo sapiens nuclear RNA helicase (DEA... 30 9.5
BX248516-6|CAM25877.1| 289|Homo sapiens HLA-B associated transc... 30 9.5
BX248516-5|CAM25876.1| 245|Homo sapiens HLA-B associated transc... 30 9.5
BX248516-4|CAI41924.2| 425|Homo sapiens HLA-B associated transc... 30 9.5
BX248516-3|CAI41922.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
BX001040-7|CAI18635.1| 245|Homo sapiens HLA-B associated transc... 30 9.5
BX001040-6|CAI18634.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
BT009909-1|AAP88911.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
BC013006-1|AAH13006.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
BC000361-1|AAH00361.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
BA000025-40|BAB63306.1| 428|Homo sapiens putative ATP-dependent... 30 9.5
AL662847-23|CAO72086.1| 289|Homo sapiens HLA-B associated trans... 30 9.5
AL662847-22|CAO72085.1| 245|Homo sapiens HLA-B associated trans... 30 9.5
AL662847-21|CAI17672.2| 425|Homo sapiens HLA-B associated trans... 30 9.5
AL662847-20|CAI17664.2| 428|Homo sapiens HLA-B associated trans... 30 9.5
AL662801-6|CAI18282.2| 289|Homo sapiens HLA-B associated transc... 30 9.5
AL662801-5|CAM25576.1| 245|Homo sapiens HLA-B associated transc... 30 9.5
AL662801-4|CAI18284.2| 425|Homo sapiens HLA-B associated transc... 30 9.5
AL662801-3|CAI18280.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
AK222912-1|BAD96632.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
AF029062-1|AAC63046.1| 284|Homo sapiens DEAD-box protein protein. 30 9.5
AF029061-1|AAB94615.1| 284|Homo sapiens BAT1 protein. 30 9.5
AB209217-1|BAD92454.1| 310|Homo sapiens HLA-B associated transc... 30 9.5
AB202112-3|BAE78637.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
AB103621-3|BAF31287.1| 443|Homo sapiens BAT1 protein protein. 30 9.5
AB088115-3|BAC54953.1| 428|Homo sapiens HLA-B associated transc... 30 9.5
>CR457169-1|CAG33450.1| 178|Homo sapiens HSPC111 protein.
Length = 178
Score = 102 bits (244), Expect = 1e-21
Identities = 49/139 (35%), Positives = 83/139 (59%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + + ++ K ++D
Sbjct: 28 RKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAVPL--------RKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERD 176
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYKAM RD
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARD 136
Query: 175 KKNYYQETWKQLRSKIKTF 119
+KNYYQ+T KQ+RSKI +
Sbjct: 137 EKNYYQDTPKQIRSKINVY 155
>BC040106-1|AAH40106.1| 178|Homo sapiens hypothetical protein
HSPC111 protein.
Length = 178
Score = 102 bits (244), Expect = 1e-21
Identities = 49/139 (35%), Positives = 83/139 (59%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + + ++ K ++D
Sbjct: 28 RKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAVPL--------RKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERD 176
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYKAM RD
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARD 136
Query: 175 KKNYYQETWKQLRSKIKTF 119
+KNYYQ+T KQ+RSKI +
Sbjct: 137 EKNYYQDTPKQIRSKINVY 155
>AY561704-1|AAS66977.1| 178|Homo sapiens HBV pre-S2 trans-regulated
protein 3 protein.
Length = 178
Score = 102 bits (244), Expect = 1e-21
Identities = 49/139 (35%), Positives = 83/139 (59%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + + ++ K ++D
Sbjct: 28 RKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAVPL--------RKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERD 176
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYKAM RD
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARD 136
Query: 175 KKNYYQETWKQLRSKIKTF 119
+KNYYQ+T KQ+RSKI +
Sbjct: 137 EKNYYQDTPKQIRSKINVY 155
>AF151875-1|AAD34112.1| 178|Homo sapiens CGI-117 protein protein.
Length = 178
Score = 102 bits (244), Expect = 1e-21
Identities = 49/139 (35%), Positives = 83/139 (59%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + + ++ K ++D
Sbjct: 28 RKAARGIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAVPL--------RKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERD 176
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYKAM RD
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKAMARD 136
Query: 175 KKNYYQETWKQLRSKIKTF 119
+KNYYQ+T KQ+RSKI +
Sbjct: 137 EKNYYQDTPKQIRSKINVY 155
>BC019331-1|AAH19331.1| 231|Homo sapiens HSPC111 protein protein.
Length = 231
Score = 68.1 bits (159), Expect = 3e-11
Identities = 33/116 (28%), Positives = 64/116 (55%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + +++ K ++D
Sbjct: 28 RKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAV--------PLRKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKA 188
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYK+
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYKS 132
>BC032424-1|AAH32424.1| 232|Homo sapiens HSPC111 protein protein.
Length = 232
Score = 67.7 bits (158), Expect = 4e-11
Identities = 33/115 (28%), Positives = 63/115 (54%)
Frame = -3
Query: 535 KKVPGNVQCSIVKEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQID 356
+K ++CS ++ AW++ K+ +NL EMGL DPN+ + +++ K ++D
Sbjct: 28 RKAAPRIECSHIRHAWDHAKSVRQNLAEMGLAVDPNRAV--------PLRKRKVKAMEVD 79
Query: 355 SDEEVETVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYK 191
+E + +VR P V LE +A P K+ L + ++++ Y+++ +G DYK
Sbjct: 80 IEERPKELVRKP---YVLNDLEAEASLPEKKGNTLSRDLIDYVRYMVENHGEDYK 131
>BC118982-1|AAI18983.1| 553|Homo sapiens KIAA2012 protein protein.
Length = 553
Score = 33.9 bits (74), Expect = 0.58
Identities = 20/110 (18%), Positives = 53/110 (48%)
Frame = -3
Query: 499 KEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLP 320
K +W+ + +R + + + + +Q Q++RAK+M +++ +++ T
Sbjct: 355 KASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIRL 414
Query: 319 PKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKK 170
K+ + E+ ++Q + RK++ L Q E +++ + ++R K+
Sbjct: 415 RKQRLQEEQQRQEEEERKQQLRLKAAQ-ERARQQQEEFRRKLRELQRKKQ 463
>AB095932-1|BAC23108.1| 555|Homo sapiens KIAA2012 protein protein.
Length = 555
Score = 33.9 bits (74), Expect = 0.58
Identities = 20/110 (18%), Positives = 53/110 (48%)
Frame = -3
Query: 499 KEAWNNKKTSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLP 320
K +W+ + +R + + + + +Q Q++RAK+M +++ +++ T
Sbjct: 357 KASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIRL 416
Query: 319 PKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYLLDKYGNDYKAMERDKK 170
K+ + E+ ++Q + RK++ L Q E +++ + ++R K+
Sbjct: 417 RKQRLQEEQQRQEEEERKQQLRLKAAQ-ERARQQQEEFRRKLRELQRKKQ 465
>BC119717-1|AAI19718.1| 438|Homo sapiens C1orf67 protein protein.
Length = 438
Score = 33.1 bits (72), Expect = 1.0
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = -3
Query: 484 NKKTSARNLREMGLVS-DPNKTIKIPNFKQTQIQRAKQMVNQIDS------DEEVETVVR 326
N NL + LV D ++T + F + Q+Q+A Q + Q++ E T ++
Sbjct: 295 NYNDHENNLSAICLVKLDSSRTYSLDEFCEEQLQQATQALKQLEDIRNKAISEMKSTFLK 354
Query: 325 LPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFITYL 218
+ K E+ E E + F LPK + T+L
Sbjct: 355 VAEKNEIKEYFESKLSEDDTTHFKLPKYRRLLETFL 390
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 31.9 bits (69), Expect = 2.3
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Frame = -3
Query: 475 TSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSD------------EEVETV 332
++ARNL L + IK+ K +I K+ + Q+D+D EE + +
Sbjct: 747 SNARNLNTSALQLEHEHLIKLNQKKDMEIAELKKNIEQMDTDHKETKDVLSSSLEEQKQL 806
Query: 331 VRLPPKKEV-AEKLEKQAKAPRKR--KFMLPKGQVEFITYLLDKYGNDYKAMERDKKNYY 161
+L KKE+ EKL++++ ++ K+ + E + +++ +M +++ N+
Sbjct: 807 TQLINKKEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKDRSLGSM-KEENNHL 865
Query: 160 QETWKQLRSK 131
QE ++LR +
Sbjct: 866 QEELERLREE 875
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 31.9 bits (69), Expect = 2.3
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Frame = -3
Query: 475 TSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSD------------EEVETV 332
++ARNL L + IK+ K +I K+ + Q+D+D EE + +
Sbjct: 462 SNARNLNTSALQLEHEHLIKLNQKKDMEIAELKKNIEQMDTDHKETKDVLSSSLEEQKQL 521
Query: 331 VRLPPKKEV-AEKLEKQAKAPRKR--KFMLPKGQVEFITYLLDKYGNDYKAMERDKKNYY 161
+L KKE+ EKL++++ ++ K+ + E + +++ +M +++ N+
Sbjct: 522 TQLINKKEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKDRSLGSM-KEENNHL 580
Query: 160 QETWKQLRSK 131
QE ++LR +
Sbjct: 581 QEELERLREE 590
>AK096141-1|BAC04709.1| 638|Homo sapiens protein ( Homo sapiens
cDNA FLJ38822 fis, clone LIVER2008706, moderately
similar to Mus musculus purine nucleotide binding
protein mRNA. ).
Length = 638
Score = 31.9 bits (69), Expect = 2.3
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = -3
Query: 433 PNKTIKIPNFKQTQIQRAKQMVNQI-DSDEEV----ETVVRLPPKKEVAEKLEKQAKAPR 269
P K +K Q+ +Q + I SD+ + + + KKE AEK ++ + +
Sbjct: 450 PRKGVKADEVLQSFLQSQVVIEESILQSDKALTAGEKAIAAKQAKKEAAEKEQELLRQKQ 509
Query: 268 KRKFMLPKGQVEFITYLLDKYGNDYKAMERDKKNYYQETWKQLRSKIK 125
K + + + Q + K MER+++NY +E K L K+K
Sbjct: 510 KEQQQMMEAQERSFQ---ENIAQLKKKMERERENYMRELRKMLSHKMK 554
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 31.9 bits (69), Expect = 2.3
Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Frame = -3
Query: 475 TSARNLREMGLVSDPNKTIKIPNFKQTQIQRAKQMVNQIDSD------------EEVETV 332
++ARNL L + IK+ K +I K+ + Q+D+D EE + +
Sbjct: 747 SNARNLNTSALQLEHEHLIKLNQKKDMEIAELKKNIEQMDTDHKETKDVLSSSLEEQKQL 806
Query: 331 VRLPPKKEV-AEKLEKQAKAPRKR--KFMLPKGQVEFITYLLDKYGNDYKAMERDKKNYY 161
+L KKE+ EKL++++ ++ K+ + E + +++ +M +++ N+
Sbjct: 807 TQLINKKEIFIEKLKERSSKLQEELDKYSQALRKNEILRQTIEEKDRSLGSM-KEENNHL 865
Query: 160 QETWKQLRSK 131
QE ++LR +
Sbjct: 866 QEELERLREE 875
>EF560715-1|ABQ59025.1| 730|Homo sapiens MTSS1 protein protein.
Length = 730
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -3
Query: 400 QTQIQRAKQMVNQIDSDEEVE-TVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFIT 224
Q Q++ K++ NQ+D D E R KK+ ++ L+ Q KA + R + P+ +
Sbjct: 109 QEQMEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQ-----LD 163
Query: 223 YLLDKYGNDYKAMERDKKNYYQETWKQLRSKIKTFMGI 110
L + Y +E +K ++ + R + TF+ +
Sbjct: 164 SALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISM 201
>AF086645-1|AAF15947.1| 755|Homo sapiens metastasis suppressor
protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -3
Query: 400 QTQIQRAKQMVNQIDSDEEVE-TVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFIT 224
Q Q++ K++ NQ+D D E R KK+ ++ L+ Q KA + R + P+ +
Sbjct: 109 QEQMEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQ-----LD 163
Query: 223 YLLDKYGNDYKAMERDKKNYYQETWKQLRSKIKTFMGI 110
L + Y +E +K ++ + R + TF+ +
Sbjct: 164 SALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISM 201
>AB007889-1|BAA24859.3| 666|Homo sapiens KIAA0429 protein.
Length = 666
Score = 31.5 bits (68), Expect = 3.1
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = -3
Query: 400 QTQIQRAKQMVNQIDSDEEVE-TVVRLPPKKEVAEKLEKQAKAPRKRKFMLPKGQVEFIT 224
Q Q++ K++ NQ+D D E R KK+ ++ L+ Q KA + R + P+ +
Sbjct: 45 QEQMEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQ-----LD 99
Query: 223 YLLDKYGNDYKAMERDKKNYYQETWKQLRSKIKTFMGI 110
L + Y +E +K ++ + R + TF+ +
Sbjct: 100 SALQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISM 137
>Z37166-1|CAA85523.1| 428|Homo sapiens nuclear RNA helicase (DEAD
family) protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BX248516-6|CAM25877.1| 289|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BX248516-5|CAM25876.1| 245|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 245
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 104 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 162
Query: 262 KFM 254
KFM
Sbjct: 163 KFM 165
>BX248516-4|CAI41924.2| 425|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BX248516-3|CAI41922.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BX001040-7|CAI18635.1| 245|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 245
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BX001040-6|CAI18634.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BT009909-1|AAP88911.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BC013006-1|AAH13006.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BC000361-1|AAH00361.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>BA000025-40|BAB63306.1| 428|Homo sapiens putative ATP-dependent
RNA helicase protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662847-23|CAO72086.1| 289|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662847-22|CAO72085.1| 245|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 245
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 104 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 162
Query: 262 KFM 254
KFM
Sbjct: 163 KFM 165
>AL662847-21|CAI17672.2| 425|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662847-20|CAI17664.2| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662801-6|CAI18282.2| 289|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 289
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662801-5|CAM25576.1| 245|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 245
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 104 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 162
Query: 262 KFM 254
KFM
Sbjct: 163 KFM 165
>AL662801-4|CAI18284.2| 425|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AL662801-3|CAI18280.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AK222912-1|BAD96632.1| 428|Homo sapiens HLA-B associated
transcript 1 variant protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AF029062-1|AAC63046.1| 284|Homo sapiens DEAD-box protein protein.
Length = 284
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 38 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPXEKQVMMFSATLSKEIR-PVCR 96
Query: 262 KFM 254
KFM
Sbjct: 97 KFM 99
>AF029061-1|AAB94615.1| 284|Homo sapiens BAT1 protein.
Length = 284
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 38 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 96
Query: 262 KFM 254
KFM
Sbjct: 97 KFM 99
>AB209217-1|BAD92454.1| 310|Homo sapiens HLA-B associated
transcript 1 variant protein.
Length = 310
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 202 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 260
Query: 262 KFM 254
KFM
Sbjct: 261 KFM 263
>AB202112-3|BAE78637.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
>AB103621-3|BAF31287.1| 443|Homo sapiens BAT1 protein protein.
Length = 443
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 197 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 255
Query: 262 KFM 254
KFM
Sbjct: 256 KFM 258
>AB088115-3|BAC54953.1| 428|Homo sapiens HLA-B associated
transcript 1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 9.5
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = -3
Query: 430 NKTIKIPNFKQTQIQRAKQMVNQIDSDEEVETVVRLPP-KKEV---AEKLEKQAKAPRKR 263
NK++ + + K + +M+ Q+D +V+ + R+ P +K+V + L K+ + P R
Sbjct: 182 NKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIR-PVCR 240
Query: 262 KFM 254
KFM
Sbjct: 241 KFM 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,795,694
Number of Sequences: 237096
Number of extensions: 1469370
Number of successful extensions: 3715
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3701
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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